Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq100917 149 1e-30
seq87608 104 5e-17
seq86681 89.7 1e-12
seq72213 89.7 1e-12
seq72212 89.7 1e-12
seq72211 89.7 1e-12
>seq100917
Length=15418
Score = 149 bits (164), Expect = 1e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || | |||||| || |||||||| | || ||||| || |||||||| ||
Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || | || || |||| ||||| || || || ||||| || || || ||| |||
Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || ||||| || || || | ||||| |||||||| | || |||
Sbjct 7666 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACT 7607
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| ||||| |||||||| || | ||||| |||||||||||||||||
Sbjct 7606 TCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTT 7557
>seq87608
Length=6889
Score = 104 bits (114), Expect = 5e-17
Identities = 198/286 (69%), Gaps = 8/286 (3%)
Strand=Plus/Minus
Query 273623 CCAACCGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATA 273682
|||||| ||||| ||||| | ||||||||||||| |||| | ||||| |||||
Sbjct 3116 CCAACCCGTGCCGATACCCTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATA 3057
Query 273683 ATATTCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCC-G 273741
| |||| ||||| ||||| | |||||||||||| || || | | | |||||| |
Sbjct 3056 AAATTCAGGCTCGATTTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTG 2997
Query 273742 TATCAACGAAAACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCG 273801
| | | ||||| ||||| | | |||| | || | || || || || | | |||||
Sbjct 2996 TGGCGA-GAAAATTTTTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAGGACTCG 2938
Query 273802 CATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACC-CTCGG--GCAGTAGCCAGT 273858
|| ||| || || || || || | || ||||||||||| |||| | |||| |||
Sbjct 2937 CAGCGTCTTTTCCGCCCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTA---AGT 2881
Query 273859 TTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGT 273904
| || || ||||| ||||| || | || || | ||| | |||||
Sbjct 2880 TAATATTATTGCTGCCGACATAGTTTTGGGCTAAATTGATAATAGT 2835
>seq86681
Length=5981
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1344 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1288
>seq72213
Length=1366
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 8 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 64
>seq72212
Length=11577
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 8 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 64
>seq72211
Length=440
Score = 89.7 bits (98), Expect = 1e-12
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810
||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 8 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 64
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1045377344870430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |