Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq100917 149 1e-30 seq87608 104 5e-17 seq86681 89.7 1e-12 seq72213 89.7 1e-12 seq72212 89.7 1e-12 seq72211 89.7 1e-12 >seq100917 Length=15418 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || | |||||| || |||||||| | || ||||| || |||||||| || Sbjct 7786 CCGCCTCTCAGGCGCAGCACCAGATGAAGTGTCGACTCTTTCTGTATGTTGTAATCGCTT 7727 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | || || |||| ||||| || || || ||||| || || || ||| ||| Sbjct 7726 AGTGTTCTTCCGTCTTCTAACTGTTTGCCAGCGAATATCAACCGCTGCTGATCAGGAGGA 7667 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| || || || | ||||| |||||||| | || ||| Sbjct 7666 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCGATGGTGTCCGACGGCTCCACT 7607 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 ||||| ||||| |||||||| || | ||||| ||||||||||||||||| Sbjct 7606 TCGAGCGTGATTGTCTTACCAGTGAGTGTCTTCACGAATATCTGCATTTT 7557 >seq87608 Length=6889 Score = 104 bits (114), Expect = 5e-17 Identities = 198/286 (69%), Gaps = 8/286 (3%) Strand=Plus/Minus Query 273623 CCAACCGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATA 273682 |||||| ||||| ||||| | ||||||||||||| |||| | ||||| ||||| Sbjct 3116 CCAACCCGTGCCGATACCCTCACCGCCATTCACCAGAACCATCGGAAGTATTGGCACATA 3057 Query 273683 ATATTCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCC-G 273741 | |||| ||||| ||||| | |||||||||||| || || | | | |||||| | Sbjct 3056 AAATTCAGGCTCGATTTTCAAATTATCGTCGTAAAGATAATTGAGAAGCGGGTCATCCTG 2997 Query 273742 TATCAACGAAAACCTTTCGCGTCTGAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCG 273801 | | | ||||| ||||| | | |||| | || | || || || || | | ||||| Sbjct 2996 TGGCGA-GAAAATTTTTCGGGCCAAAGGACTAAGCATTGTAAAGATATAACGAGGACTCG 2938 Query 273802 CATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACC-CTCGG--GCAGTAGCCAGT 273858 || ||| || || || || || | || ||||||||||| |||| | |||| ||| Sbjct 2937 CAGCGTCTTTTCCGCCCTGAAGTCGCGTTCCAAACTGACCGATCGGTTGAAGTA---AGT 2881 Query 273859 TTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGT 273904 | || || ||||| ||||| || | || || | ||| | ||||| Sbjct 2880 TAATATTATTGCTGCCGACATAGTTTTGGGCTAAATTGATAATAGT 2835 >seq86681 Length=5981 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 1344 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 1288 >seq72213 Length=1366 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 8 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 64 >seq72212 Length=11577 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 8 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 64 >seq72211 Length=440 Score = 89.7 bits (98), Expect = 1e-12 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 8 TAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045377344870430