Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06]
101,545 sequences; 113,565,242 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq100917 149 2e-30
seq44500 98.7 2e-15
seq39385 95.1 3e-14
seq95989 84.2 5e-11
>seq100917
Length=15418
Score = 149 bits (164), Expect = 2e-30
Identities = 170/228 (75%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || |||||||| || ||||| || || || ||||| ||||| |||||
Sbjct 7557 AAAATGC---AGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAG 7613
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| |||||||||||||| || || |||||||||||||| || || || |||||
Sbjct 7614 CCGTCGGACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCT 7673
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| || | || ||||| || |||||| | ||||| ||||| || || ||||
Sbjct 7674 GATCAGCAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGAT 7733
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| ||| | || ||||| || ||||| ||||| || || | || |||
Sbjct 7734 TACAACATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGA 7781
>seq44500
Length=545
Score = 98.7 bits (108), Expect = 2e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044
|||||||||| ||||| ||||||| |||| || ||||| || ||||| || |||||
Sbjct 66 CCATCGAGAATGTCAAGACAAAGATTGAGGAAAAGGAAGGCATTCCTCCCGATCAGCAGA 125
Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104
||| ||||| ||||| | ||| || ||||||||||| || || ||||| ||| |
Sbjct 126 TACTGATCTTTGCCGGCAGACAACTGGAAGATGGAAGAACACTCAATGATTACAACATTG 185
Query 178105 AAAAAGAATCAACACTGCATCTTGTTTTG 178133
| || || | ||||| || || ||||||
Sbjct 186 AGAAGGATTGCACACTTCAACTGGTTTTG 214
>seq39385
Length=5141
Score = 95.1 bits (104), Expect = 3e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067
||||||||||| ||||| || ||||| || ||||| ||||| |||||||| || |||||
Sbjct 106 ATTCAGGACAAGGAAGGCATTCCTCCCGATCAGCAGCGACTGATCTTCGCTGGCAAACAA 165
Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099
|| ||||||||||| || || |||||||||
Sbjct 166 CTGGAAGATGGAAGAACACTCAGCGATTATAA 197
>seq95989
Length=12046
Score = 84.2 bits (92), Expect = 5e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 178029 CCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTT 178088
||||| || ||||||||| | || ||||| || ||||| || || |||||| | ||| |
Sbjct 12046 CCTCCCGATCAGCAACGATTGATATTCGCAGGCAAACAACTAGAGGATGGACGCACTTTA 11987
Query 178089 GCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||||| ||||||||||||| || || ||| | ||| | | ||||||
Sbjct 11986 AGTGATTATAACATCCAAAAAGAATCTACTCTTCATTTGGTTCTTCGTCTCAGA 11933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202165091164730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |