Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steganacarus_20magnus_20[genbank_20GCA_5F000988885.1_202015-05-06] 101,545 sequences; 113,565,242 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq100917 149 2e-30 seq44500 98.7 2e-15 seq39385 95.1 3e-14 seq95989 84.2 5e-11 >seq100917 Length=15418 Score = 149 bits (164), Expect = 2e-30 Identities = 170/228 (75%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || |||||||| || ||||| || || || ||||| ||||| ||||| Sbjct 7557 AAAATGC---AGATATTCGTGAAGACACTCACTGGTAAGACAATCACGCTCGAAGTGGAG 7613 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || |||||||||||||| || || |||||||||||||| || || || ||||| Sbjct 7614 CCGTCGGACACCATCGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCT 7673 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| || | || ||||| || |||||| | ||||| ||||| || || |||| Sbjct 7674 GATCAGCAGCGGTTGATATTCGCTGGCAAACAGTTAGAAGACGGAAGAACACTAAGCGAT 7733 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || ||| | || ||||| || ||||| ||||| || || | || ||| Sbjct 7734 TACAACATACAGAAAGAGTCGACACTTCATCTGGTGCTGCGCCTGAGA 7781 >seq44500 Length=545 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044 |||||||||| ||||| ||||||| |||| || ||||| || ||||| || ||||| Sbjct 66 CCATCGAGAATGTCAAGACAAAGATTGAGGAAAAGGAAGGCATTCCTCCCGATCAGCAGA 125 Query 178045 GACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCC 178104 ||| ||||| ||||| | ||| || ||||||||||| || || ||||| ||| | Sbjct 126 TACTGATCTTTGCCGGCAGACAACTGGAAGATGGAAGAACACTCAATGATTACAACATTG 185 Query 178105 AAAAAGAATCAACACTGCATCTTGTTTTG 178133 | || || | ||||| || || |||||| Sbjct 186 AGAAGGATTGCACACTTCAACTGGTTTTG 214 >seq39385 Length=5141 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 178008 ATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAG 178067 ||||||||||| ||||| || ||||| || ||||| ||||| |||||||| || ||||| Sbjct 106 ATTCAGGACAAGGAAGGCATTCCTCCCGATCAGCAGCGACTGATCTTCGCTGGCAAACAA 165 Query 178068 CTCGAAGATGGAAGGACTCTTGCCGATTATAA 178099 || ||||||||||| || || ||||||||| Sbjct 166 CTGGAAGATGGAAGAACACTCAGCGATTATAA 197 >seq95989 Length=12046 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 178029 CCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTT 178088 ||||| || ||||||||| | || ||||| || ||||| || || |||||| | ||| | Sbjct 12046 CCTCCCGATCAGCAACGATTGATATTCGCAGGCAAACAACTAGAGGATGGACGCACTTTA 11987 Query 178089 GCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||| ||||||||||||| || || ||| | ||| | | |||||| Sbjct 11986 AGTGATTATAACATCCAAAAAGAATCTACTCTTCATTTGGTTCTTCGTCTCAGA 11933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202165091164730