Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3821 87.8 2e-12 >seq3821 Length=102291 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 17353 ATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA 17412 |||||| ||||| ||||| || ||||| || ||||| || || || || ||| || | Sbjct 84878 ATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAAAGTG 84937 Query 17413 TTTTTCGTCCGG-TGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTT 17471 ||||| || || | ||| | ||| || || |||||| |||| || ||||||| Sbjct 84938 CTTTTCTTCGGGCTTTAACTTTTC-CCAATCTCCTAGATCTTTTGATAAGTCAACTTCTT 84996 Query 17472 CGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTA 17531 | | ||||| || ||| | |||||||||||||| | ||| ||||| | || | | Sbjct 84997 CAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACTCAA 85056 Query 17532 TGGGGAATACAACATATCTA 17551 |||| |||| ||| ||||| Sbjct 85057 TGGGAAATATTACAAATCTA 85076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517101461774040