Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq12019 95.1 1e-14 >seq12019 Length=383594 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/149 (74%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 29040 AAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCG 29099 ||||||||| | ||||||||||| | || |||||| || |||||||| ||||| Sbjct 131577 AAGCAAAAA-TCCAAGATAAAGAAGGAATCCCTCCAGATCAGCAGAGACTTATTTTTGCT 131519 Query 29100 GGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACT 29159 || ||||| || |||||| | ||| || | || ||||| ||||| || || |||||| Sbjct 131518 GGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAACATTCAAAAAGAGTCTACT 131459 Query 29160 CTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| |||| || ||||| |||| || Sbjct 131458 CTTCATTTGGTTTTGAGATTAAGAGGTGG 131430 Score = 86.0 bits (94), Expect = 5e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||||||||| | || |||||| ||| | ||||| ||||| ||||| || || ||| Sbjct 125536 GATAAAGAAGGAATTCCTCCAGATCAGCAACGTCTTATTTTTGCTGGCAAGCAGCTTGAA 125477 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||| || ||| | | ||||| || |||||||||||||||||||| || Sbjct 125476 GATGGCAGAACCCTTTCTGATTATAACATTCAGAAGGAATCTACTCTGCA 125427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427977607654715