Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq12019 107 2e-18 >seq12019 Length=383594 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| ||| | ||| ||||| ||||||||||| ||||| | ||| || || | || || Sbjct 131448 ACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCA 131507 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 |||||||| || ||| |||||||||||||||| || || | ||||| || || | Sbjct 131508 AGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCTTTATCTTGG 131567 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 || ||| ||| || | ||| || |||| ||||| ||| | ||||| || || Sbjct 131568 ATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAATCGTTTTT 131627 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | ||||| ||||| || ||||| Sbjct 131628 CCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || | |||||| || | ||| | |||||| ||||| ||||||||||| || | | Sbjct 132798 CCACCACGTAACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGAC 132857 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | |||| | | || || | || || || ||| | || || ||||| ||||| || Sbjct 132858 AAGGTTCGACCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGA 132917 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||| || | | | ||||||| |||||| Sbjct 132918 ATTCCTTCCTTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACC 132977 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||| || ||||| || || || | ||||| ||||| || ||||||||| Sbjct 132978 TCCAAAGTGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTTG 133028 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| ||||| | ||| | ||||| ||| || || || |||||||||||||| | Sbjct 132114 CCTCCTCGAAGCCTCAACACTAGATGCAGAGTAGATTCTTTCTGAATGTTATAGTCTGAT 132173 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || |||| ||| || || ||| | || || ||||| || || || Sbjct 132174 AATGTACGCCCATCTTCCAACTGCTTACCAGCAAATATGAGCCTCTGTTGATCAGGTGGG 132233 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || ||| || |||||| | | | || |||| ||| || | Sbjct 132234 ATGCCTTCCTTATCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCACTGGGTTCAACT 132293 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| || || | ||||| ||||| || ||||| Sbjct 132294 TCCAATGTAATGGTCTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132340 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 20958 AGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGG 21017 ||||| || || | ||| | || || || |||||||| |||||||| | || || | Sbjct 131667 AGCCTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGA 131726 Query 21018 GCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCC 21077 | || || | ||||| || ||| | ||||| | |||||| || || | |||||| Sbjct 131727 CCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCT 131786 Query 21078 TTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTA 21137 || || ||| ||| |||||| | | | || |||| |||||| || | ||| Sbjct 131787 TTATCCTGGATTTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTA 131846 Query 21138 ATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||||||||| || | ||||| ||||| |||||||| Sbjct 131847 ATGGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421905892164548