Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq8969 86.0 1e-11 >seq8969 Length=258277 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/178 (72%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 51885 GATAGCCAGAGCATTATGGTTGTACTATATATCCAAAGGGA-TAGAATACTTGGATACGG 51943 ||| || | ||||||||||| ||| || | | ||||| | |||||| || || || Sbjct 232747 GATTGCTAAAGCATTATGGTGGTATTACTTCT-CAAAGCTACTAGAATTCTGTGACACTT 232805 Query 51944 TATTTTTCATACTTAGGAAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATT 52003 ||||||| || || |||| ||| |||||| ||| ||||| || |||| ||||||| Sbjct 232806 TATTTTTTATTCTCCGGAAGAAAAATAATCAACTTACATTTCTTCATATATACCATCATT 232865 Query 52004 TTACTATGTTTACTCTAGGATGGATAGGTATTAAATGGTTTGCTGGAGG-TCAGGCAT 52060 || |||||| ||| | ||||| || | || ||| || ||||||| ||||| || Sbjct 232866 CCACAATGTTTGGACTATGGTGGATTGGAGTGAAGTGGGTTCCTGGAGGATCAGGTAT 232923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922404547126120