Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3821 125 7e-24 >seq3821 Length=102291 Score = 125 bits (138), Expect = 7e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 14589 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14648 ||||||||||||| || || |||||||| |||||||||||||| || |||| | ||||| Sbjct 84874 CCAAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAA 84933 Query 14649 AGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14708 ||| | ||||| | | |||| |||||| ||| ||| || || | || |||| Sbjct 84934 AGTGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACTT 84993 Query 14709 CATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14768 | ||| | ||||| || ||| |||| ||||||||||| |||||| |||| ||| Sbjct 84994 CTTCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACT 85053 Query 14769 ATATAGGAAAAACTACAAATCT 14790 || ||||| | ||||||||| Sbjct 85054 CAATGGGAAATATTACAAATCT 85075 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||||| ||| || | ||| || |||||| | || ||||| || |||| || | Sbjct 78312 CCTCATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACCTCTCTTCT 78371 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||| ||||| | || ||||| || |||||||||||||| || || |||||||| | Sbjct 78372 TCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGCAGCAAATG 78431 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT--ATCCATTTTCTAGCCCATTC 14403 | | | |||||| ||||| ||||| | || ||| ||||| || |||||| || Sbjct 78432 CAACGATTCGTTCACCAAAGGATGC--ATGCGTATGATTAATCCAATTCAAAGCCCAATC 78489 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCC 14455 || ||| || || | | | | |||||||||||||| ||||| | |||| Sbjct 78490 AGCTTTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAATAACTTTTCC 78541 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 13852 AAACTAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCAT 13911 ||| |||||||| ||||||| | ||| | ||| || || ||||| || || || Sbjct 76388 AAATTAAAAATCTGCATCTAATGTGAAACGGTGATCCTCCTTTTTAGACATGACTCCACA 76447 Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 ||||||||||| | ||| |||| ||||| ||||| ||||| ||||| | |||| Sbjct 76448 CTTTTGATATTCTCCGACTTTTTTCTCAAAAAAGTTTGTTTTCCCTTCTAAGCTAATATG 76507 Query 13972 TTCCATAAAATCAAATGGATTT 13993 ||||||||||||||||||||| Sbjct 76508 CTCCATAAAATCAAATGGATTT 76529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481931669094040