Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq3821 132 7e-26 seq15467 111 2e-19 >seq3821 Length=102291 Score = 132 bits (146), Expect = 7e-26 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 50344 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 50403 |||||||||||||| || || ||||| ||||||||||| || || | ||| ||||| Sbjct 84876 AAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAAAG 84935 Query 50404 TGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCT 50463 || ||||| | ||| ||| || | |||||| | |||||| |||| || |||||| Sbjct 84936 TGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACTTCT 84995 Query 50464 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGG 50523 || | ||||| || || || || |||||||||||||| | ||| || || ||||| | Sbjct 84996 TCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACTCA 85055 Query 50524 ATTGGGAAAATAACAAATCTA 50544 || || || || ||||||||| Sbjct 85056 ATGGGAAATATTACAAATCTA 85076 Score = 129 bits (142), Expect = 8e-25 Identities = 162/220 (74%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| |||| ||| || | ||| ||| ||| || || || ||||||| || | ||| | Sbjct 78312 CCTCATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACCTCTCTTCT 78371 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| |||||||| |||||||| ||||||||||| ||||||||||| || ||||| | Sbjct 78372 TCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGCAGCAAATG 78431 Query 50102 CAACAAGTCTCTCTCCATAACTGGC--GC-TGTCATGTATCCACTTTTGAGCCCAATCGG 50158 |||| | || || ||| | || || | | || ||||| || ||||||||| | Sbjct 78432 CAACGATTCGTTCACCAAAGGATGCATGCGTATGATTAATCCAATTCAAAGCCCAATCAG 78491 Query 50159 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 | ||||| || ||||| | | ||||| || ||||| || Sbjct 78492 CTTTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAA 78531 >seq15467 Length=153806 Score = 111 bits (122), Expect = 2e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||| |||||||| ||||| || || |||| ||| || | |||||| || ||||| || | Sbjct 63800 TACCTGAAATTCCCCAGATAAAACCCTCCTAGTATAGAAATTACTAGTGTATGGCTCTAT 63859 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 |||||||||||||| | |||||| |||||||| || ||||||||||| || || | || Sbjct 63860 AGATTCATTATTTCCAAGAATTTGCGCAGTTGAAGCTGTTGGCATAGGGGCTACAAGCAA 63919 Query 79179 ACTATTTCT 79187 ||| || || Sbjct 63920 ACTGTTCCT 63928 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 ||||||||||||| ||| | |||| || | |||||||| || ||||| ||| | || Sbjct 67360 TATGTTTCATAAGTTCCATATTTTTGAGCCAGCTCACAACTAGCTTCTAAAGCTGCAAAA 67419 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||| ||||| || || | |||| | | ||| |||||| || || |||||||| Sbjct 67420 TAAATAGTTTCAAATATTTCAATATTTAACTTTTGAGCTTCTTCACTGTCGAATGGATAC 67479 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 | | | ||| || | || || || |||||||| || || || || |||||||| || Sbjct 67480 CTCATCAAAATGAAAGTATCAGCCAAGCCTTGAACTCCTATTCCAATTGGTCTATGCCTT 67539 Query 79480 TTATTAGAAATTTCAGC 79496 |||||||| | ||||| Sbjct 67540 TTATTAGACTTCTCAGC 67556 Score = 100 bits (110), Expect = 4e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 79669 ATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 79728 ||||||||||| || ||||| |||| |||||||||||||| | |||||| ||| Sbjct 76390 ATTTCAGTGCATAGATTACTGCACTGTATGGTTCCTAAATTCTTTTGATTTGATTTTCGA 76449 Query 79729 TTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATC 79788 ||||| ||||| ||||| | || | || || || ||||||||||||||||| ||||| Sbjct 76450 TTACAAGCATCTTTATACAACATATATGGGGTTCCTGTTTCAATCTGAGATTCAATAATT 76509 Query 79789 GCTTTCCA 79796 || | ||| Sbjct 76510 GCATACCA 76517 Score = 95.1 bits (104), Expect = 2e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 80679 ACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAAT 80738 ||||||| |||||||| || || || |||||||||| ||| || | || || | || Sbjct 143694 ACTAAATGACTTTTTTGTCTCTTTATGCAGATTTGATATGGCAATGCGTGCAGCAAGGAT 143753 Query 80739 GGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAA 80798 ||||||||| ||||||| |||||| ||| ||||| ||||| || |||| | || | Sbjct 143754 GGCATAATCAGGATGTTTTGTAGTCATAGTCGCTGCAATTTCTGCAGCCAAGTTATCAAG 143813 Query 80799 TTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 80843 ||| || ||||| || ||| ||| | || | || || ||||| Sbjct 143814 TTCAACAGTTGTAACACCAGGATACAAGCCATTTATGACTTTCAT 143858 Score = 93.3 bits (102), Expect = 6e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 79851 ATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACA 79910 ||| ||| ||| || || || ||||| || | | ||| || |||| | ||||| Sbjct 76864 ATACAATTCTTCAAATTCCTCCCCCCAGCATTCATGAAGTCCTGGTGATTCATTTGGACA 76923 Query 79911 CATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 79970 ||| || |||| | | || | | ||||||||||||||| | ||| |||||||| | Sbjct 76924 CATTAAACTCCACATTTCGTCCTTTTCTACTCGTTTCATAAATAAATCTGGAATCCACAA 76983 Query 79971 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 80030 || ||| |||||||||| || ||||| || || || |||||||| || | ||| | Sbjct 76984 TGCATAAAACAGATCTCTGGCCCTCTGCTCTTCTTTGCCAGTATTCTTCTTTAAATCTAA 77043 Query 80031 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTC 80086 || | | || || | |||||| || || || || || || | | |||| |||| Sbjct 77044 AAAGTCAAATATGTCTGCATGCCAAGGCTCTAAATAAATTGCAAAAGCTCCAGGTC 77099 Score = 87.8 bits (96), Expect = 3e-12 Identities = 81/100 (81%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || ||||| || || ||| || |||||||| || |||||||| |||||||| ||||| Sbjct 102945 CCAATTCCTCCAGCAGATTTTGAAATTAATGCACAACGTTTTAAAGTATCATAAATGCCT 103004 Query 80278 TCTATGCTATCATCAATCAT-GTTAAGTAGAAAACAGCTA 80316 ||||| || || ||| |||| |||||| |||||||||||| Sbjct 103005 TCTATACTGTCTTCAGTCATTGTTAAG-AGAAAACAGCTA 103043 Score = 86.0 bits (94), Expect = 9e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 78786 CCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 78845 |||||| || || ||||| || |||| ||| |||| | || || || || || | ||| Sbjct 55141 CCATCCATAAAAGTGCATGCTTGTTAATTTTCCATAATTTGGTTCAGCAATGTGAACATT 55200 Query 78846 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 78905 | ||| ||||||||||| || | || || || || ||||||||||||| ||| | || Sbjct 55201 TAGAGACTGACTTTGATCTATATAAGCACCTCTATCAGCAGCCATTTTTAAGATATTTTT 55260 Query 78906 TTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 || || || ||||||| || ||| | | ||| | ||| || |||| Sbjct 55261 CTGCGGTATCTCCCAAACTGTACGATATAATTTCTTGAGATCATCAGGAA 55310 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 |||||| | ||| || | ||| ||||| || || |||||||| |||||||||| || || Sbjct 107176 AGTTCCAGAATTGAAGAGGGTTGGAGATGCATGAGTAAACCACTTTTCAGACAATAAATG 107235 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 || ||||||||||||| || || || ||| || || || || || ||||| | Sbjct 107236 ATATGTCTCAATAGCTGCATCAATGTCATCACCATGTATACCAACAGCAACTCGCATAAG 107295 Query 80454 CATGTGCTGAGGTCTTTCAAC 80474 ||| || || |||| ||||| Sbjct 107296 CATATGTTGCGGTCGCTCAAC 107316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717652408650920