Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq3821 125 7e-24 >seq3821 Length=102291 Score = 125 bits (138), Expect = 7e-24 Identities = 168/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 ||||||||| ||| || | ||| || |||||| | || ||||| || |||| || | Sbjct 78312 CCTCATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACCTCTCTTCT 78371 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | | ||| ||||| | |||||||| || |||||||||||||| || || |||||||| | Sbjct 78372 TCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGCAGCAAATG 78431 Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT--ATCCATTTTCTAGCCCATTC 14071 | | | |||||| ||||| ||||| | || ||| ||||| || |||||| || Sbjct 78432 CAACGATTCGTTCACCAAAGGATGC--ATGCGTATGATTAATCCAATTCAAAGCCCAATC 78489 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCC 14123 || ||| || || | | | | |||||||||||||| ||||| | |||| Sbjct 78490 AGCTTTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAATAACTTTTCC 78541 Score = 125 bits (138), Expect = 7e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316 ||||||||||||| || || |||||||| |||||||||||||| || |||| | ||||| Sbjct 84874 CCAAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAA 84933 Query 14317 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTT 14376 ||| | ||||| || | |||| |||||| || ||| || || | || |||| Sbjct 84934 AGTGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACTT 84993 Query 14377 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14436 | ||| | ||||| || ||| |||| ||||||||||| |||||| |||| ||| Sbjct 84994 CTTCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACT 85053 Query 14437 ATATAGGAAAAACTACAAATCT 14458 || ||||| | ||||||||| Sbjct 85054 CAATGGGAAATATTACAAATCT 85075 Score = 98.7 bits (108), Expect = 1e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 13520 AAACTAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCAT 13579 ||| |||||||| ||||||||| ||| | ||| || || ||||| || || || Sbjct 76388 AAATTAAAAATCTGCATCTAATGTGAAACGGTGATCCTCCTTTTTAGACATGACTCCACA 76447 Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 ||||||||||| | ||| |||| ||||| ||||| ||||| ||||| | |||| Sbjct 76448 CTTTTGATATTCTCCGACTTTTTTCTCAAAAAAGTTTGTTTTCCCTTCTAAGCTAATATG 76507 Query 13640 TTCCATAAAATCAAATGGATTT 13661 ||||||||||||||||||||| Sbjct 76508 CTCCATAAAATCAAATGGATTT 76529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479316315420200