Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq3821 131 2e-25 >seq3821 Length=102291 Score = 131 bits (144), Expect = 2e-25 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 14045 CCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14104 |||| |||||||| ||||| |||||||| |||||||||||||| || |||| | ||||| Sbjct 84874 CCAAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAA 84933 Query 14105 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14164 ||| | ||||| || | |||| |||||| ||| ||| || || | || |||| Sbjct 84934 AGTGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACTT 84993 Query 14165 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14224 | ||| | ||||| || ||| |||| ||||||||||| |||||| |||| ||| Sbjct 84994 CTTCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACT 85053 Query 14225 ATATAGGAAAAACTACAAATCT 14246 || ||||| | ||||||||| Sbjct 85054 CAATGGGAAATATTACAAATCT 85075 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||| ||| || | ||| || |||||| | || ||||| || |||| || | Sbjct 78312 CCTCATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACCTCTCTTCT 78371 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | ||| ||||| | || ||||| || |||||||||||||| || || |||||||| | Sbjct 78372 TCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGCAGCAAATG 78431 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT--ATCCATTTTCTAGCCCATTC 13859 | | | |||||| ||||| ||||| | || |||| ||||| || |||||| || Sbjct 78432 CAACGATTCGTTCACCAAAGGATGC--ATGCGTATGATTAATCCAATTCAAAGCCCAATC 78489 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCC 13911 || ||| || || | | | | ||||| || ||||||||||| | |||| Sbjct 78490 AGCTTTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAATAACTTTTCC 78541 Score = 98.7 bits (108), Expect = 9e-16 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 13308 AAACTAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCAT 13367 ||| |||||||| ||||||||| ||| | ||| || || ||||| || || || Sbjct 76388 AAATTAAAAATCTGCATCTAATGTGAAACGGTGATCCTCCTTTTTAGACATGACTCCACA 76447 Query 13368 TTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATT 13427 ||||||||||| | ||| |||| ||||||||||| ||||| ||||| | |||| Sbjct 76448 CTTTTGATATTCTCCGACTTTTTTCTCAAAAAAGTTTGTTTTCCCTTCTAAGCTAATATG 76507 Query 13428 TTCCATAAAATCGAATGGATTT 13449 ||||||||||| ||||||||| Sbjct 76508 CTCCATAAAATCAAATGGATTT 76529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478178093038920