Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq12019 105 5e-18 >seq12019 Length=383594 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42894 TCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTC 42953 ||| || |||||||| | ||| ||| ||||| | ||||| || |||| ||||| | Sbjct 131441 TCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCC 131500 Query 42954 GTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTT 43013 || || | ||||| || |||||||| | || ||| ||||| | || | |||||||| Sbjct 131501 ATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCTTT 131560 Query 43014 TTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTAT 43073 || ||| |||| || | | | ||||| | || ||| || |||| || || Sbjct 131561 ATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAAT 131620 Query 43074 AGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||||||| || ||||||||||||||||| ||||| Sbjct 131621 CGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | ||| || || || | ||||| | || || |||||||| || ||||| Sbjct 131694 TCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAG 131753 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 || | ||||| ||||| | || | |||||||| || ||| |||| || | Sbjct 131754 ATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGGATTTTTGCTTTCACGTTT 131813 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| ||||| | | ||| || |||| ||| || || || || || |||||||| ||| Sbjct 131814 TCAATGGTGTCACTGGGCTCTACCTCTAACGTAATGGTCTTGCCAGTAAGAGTTTTTACA 131873 Query 43099 AAAATTTGCAT 43109 ||||||||||| Sbjct 131874 AAAATTTGCAT 131884 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| | || | || ||||| | |||| ||||| || | || ||||| ||| Sbjct 132798 CCACCACGTAACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGAC 132857 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || || | || || ||||| || || ||||| || | | |||||| || | || Sbjct 132858 AAGGTTCGACCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGA 132917 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| |||| || | ||| || || | | ||| || Sbjct 132918 ATTCCTTCCTTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACC 132977 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | || || |||||||| || || ||||||||||| || |||||||| Sbjct 132978 TCCAAAGTGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381050504837874