Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq12019 140 2e-28 >seq12019 Length=383594 Score = 140 bits (154), Expect = 2e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| ||||| ||||| |||||||| || || |||||||| |||||||| || Sbjct 131430 CCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGAC 131489 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| | | | ||||| | ||||| ||||| | || | | || || || || Sbjct 131490 AGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGG 131549 Query 15257 ATTCCTTCTTTGTC-ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 ||||||||||| || | ||||||| |||||| |||| ||||| || ||| || || Sbjct 131550 ATTCCTTCTTTATCTTGGATTTTTGCT-TTTACATTTTCGATGGTGTCACTAGGCTCAAC 131608 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| ||||| ||||| ||||| |||||||| |||||||| |||||| Sbjct 131609 TTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCATA 131657 Score = 136 bits (150), Expect = 3e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208 |||| |||| ||||||||| || |||||||| || || || || ||| | | | Sbjct 131670 CTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCA 131729 Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 |||||||||||||| ||||| | || | ||| || || || |||||| |||||||| Sbjct 131730 TCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTA 131789 Query 15269 T-CACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 | | | ||||||| || || |||| ||||| || || ||||| ||||| ||||| Sbjct 131790 TCCTGGATTTTTGCT-TTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTAAT 131848 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || || || |||||||||||||||||||||||| Sbjct 131849 GGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCATA 131885 Score = 129 bits (142), Expect = 4e-25 Identities = 170/231 (74%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | || |||||||| || ||||| || |||||||| || || ||||| | Sbjct 132570 CCTCCTCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATC--TG 132627 Query 15197 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 ||| | || | ||||| || || || ||||| | || | || || || || | Sbjct 132628 AGAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAG 132687 Query 15255 GAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 |||||||||||||||| |||||| ||| |||||| |||| || ||||| || |||| Sbjct 132688 GAATTCCTTCTTTGTCTTGAATTTTAGCT-TTTACATTTTCAATTGTATCACTGGGTTCT 132746 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || || || |||||||| || |||||||| || ||||| || |||||| Sbjct 132747 ACCTCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCATA 132797 Score = 113 bits (124), Expect = 3e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | || || | ||||||||||| ||||| || || || ||||| ||||| Sbjct 132798 CCACCACGTAACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGAC 132857 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | ||| | ||||||||||| || || || |||| | | |||||||| ||| Sbjct 132858 AAGGTTCGACCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGA 132917 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||| ||||| || || ||| |||||| |||| |||||||| || || || Sbjct 132918 ATTCCTTCCTTGTCTTGGATCTTAGCT-TTTACATTTTCAATGGTATCACTTGGCTCCAC 132976 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 || || || |||||||| || || || ||||| ||||| || ||||| || Sbjct 132977 CTCCAAAGTGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||||| || ||||| | ||| | || || || ||||| || || || || Sbjct 131126 TGCCACCTCTCAGCCTCAAAACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCTG 131185 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 || |||| | ||||||| || || ||||| | ||||| | || || || || Sbjct 131186 ATAATGTTCTGCCATCTTCTAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTG 131245 Query 15255 GAATTCCTTCTTTGTC-ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 |||| |||||||| || | ||||||| || ||| |||| || ||||| || || Sbjct 131246 GAATACCTTCTTTATCTTGTATTTTTGCT-TTAACATTTTCAATAGTATCACTGGGCTCG 131304 Query 15314 ACATCTAAGGTAATGGTTTTACCTG 15338 || || || || || |||||||||| Sbjct 131305 ACTTCCAACGTTATAGTTTTACCTG 131329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361876161607473