Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq12019 102 5e-17 >seq12019 Length=383594 Score = 102 bits (112), Expect = 5e-17 Identities = 166/234 (71%), Gaps = 14/234 (6%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || |||||||| | ||| |||||||| | || ||||||||||| || ||||| |||||| Sbjct 131430 CCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGAC 131489 Query 33203 AAATTGAGT-TGGTCATC--CAA-TTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGT 33258 | |||| || |||| ||| || || ||| ||| || | | ||||| || | Sbjct 131490 A----GAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGG 131545 Query 33259 GGGTATGCCTTCTTT---TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGG 33315 || || |||||||| || | | | || |||||| ||| || ||||| | || Sbjct 131546 AGGGATTCCTTCTTTATCTTGGATTTTTGC---TTTTACATTTTCGATGGTGTCACTAGG 131602 Query 33316 TTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | ||| || | || ||||||||||| ||||||||||| || ||||| ||||| Sbjct 131603 CTCAACTTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 100 bits (110), Expect = 2e-16 Identities = 147/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 33166 ATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTG 33225 ||||||||| ||||||||||| || || |||||||| || | || || ||||| || Sbjct 132365 ATGCAATGTTGACTCTTTTTGGATGTTATAATCAGATAATGTACGTCCATCTTCCAACTG 132424 Query 33226 CTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCGCTAAT 33282 ||| ||| |||||| | | |||||| || | || ||||| || || || | | | Sbjct 132425 CTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGGAATGCCCTCCTTGTCTTGGATTTT 132484 Query 33283 CGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCC 33342 || ||| || ||| || || || |||| | ||| || | ||||| |||||||| Sbjct 132485 TGC---TTTGACATTTTCTATTGTATCACTGGGCTCAACTTCTAATGTTATGGTTTTTCC 132541 Query 33343 CGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||||||||| || || || ||||| Sbjct 132542 AGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||| |||| | ||||| |||| ||||| ||||| || |||||||| || || Sbjct 131885 ACCTCCTCTCAACCTTAGTACCAAGTGCAGAGTCGATTCTTTCTGAATATTGTAGTCCGA 131944 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | || || || || ||||| || |||||| | | ||| || || | || Sbjct 131945 TAAAGTACGTCCATCCTCTAACTGCTTCCCTGCAAATATAAGCCTTTGTTGATCAGGAGG 132004 Query 33262 TATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || |||||||| || | | | || ||| || ||| || || || | || | Sbjct 132005 AATACCTTCTTTATCCTGGATTTTAGC---TTTAACATTTTCTATTGTATCACTAGGCTC 132061 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||| || | ||| || ||||| || ||||||||||| || ||||| ||||| Sbjct 132062 AACTTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATCTGCAT 132112 Score = 84.2 bits (92), Expect = 1e-11 Identities = 164/240 (68%), Gaps = 8/240 (3%) Strand=Plus/Plus Query 33135 AATCTTCA--CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATT 33192 ||||| || || |||| | || |||||| | ||||| || || ||||| || || || Sbjct 132104 AATCTGCATCCCTCCTCGAAGCCTCAACACTAGATGCAGAGTAGATTCTTTCTGAATGTT 132163 Query 33193 GTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTG 33252 || || || || | | || ||||| ||||| ||| |||||| | | || || Sbjct 132164 ATAGTCTGATAATGTACGCCCATCTTCCAACTGCTTACCAGCAAATATGAGCCTCTGTTG 132223 Query 33253 GTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTC 33309 || | || |||||||| || || | | | || ||| || ||| ||| ||||| Sbjct 132224 ATCAGGTGGGATGCCTTCCTTATCTTGGATTTTAGC---TTTCACATTTTCAATTGTGTC 132280 Query 33310 GTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 |||||| ||| |||| || || || ||||| ||||||||||| || || || ||||| Sbjct 132281 ACTGGGTTCAACTTCCAATGTAATGGTCTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132340 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| || | ||||| | || ||||| | || || || || || || || |||||||| Sbjct 132797 ACCACCACGTAACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGA 132856 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | || || ||||||||||| |||||||| | || ||||| | || Sbjct 132857 CAAGGTTCGACCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGG 132916 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || ||||| || || ||| |||||| ||| ||| || || | || | || Sbjct 132917 AATTCCTTCCTTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCAC 132976 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372 |||| ||| || |||||||| ||||| ||||| || || || ||||| || Sbjct 132977 CTCCAAAGTGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 || || |||||||| ||||| || || || | | | | || || ||||| || ||| Sbjct 131688 GTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCTAATTGTTTACCA 131747 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTC---GCTAATCGCCTGT 33289 ||| || | ||| ||||| || | || ||||||||||| || | | | || | Sbjct 131748 GCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGGATTTTTGC---T 131804 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 || || ||| ||| ||||| |||| | || || | || || || || || |||||| Sbjct 131805 TTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTAATGGTCTTGCCAGTAAGA 131864 Query 33350 GTTTTTACGAAAATTTGCAT 33369 |||||||| ||||||||||| Sbjct 131865 GTTTTTACAAAAATTTGCAT 131884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318510876092394