Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq3821 120 3e-22 >seq3821 Length=102291 Score = 120 bits (132), Expect = 3e-22 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 13538 AAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAt 13597 || ||||| || || || || ||||| || |||||||| || | ||||| |||||| Sbjct 84876 AAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAAAG 84935 Query 13598 tttttttCGTTTTCTGAC---AACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACC 13654 | ||||| ||| | | |||||| ||||||| | |||||||||||| || || Sbjct 84936 TGCTTTTC---TTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACT 84992 Query 13655 TCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAA 13714 || ||| | ||||| || ||||| ||||||| ||||||||| ||||||||| | ||| Sbjct 84993 TCTTCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATAC 85052 Query 13715 ACAATGGGAAA 13725 |||||||||| Sbjct 85053 TCAATGGGAAA 85063 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 12956 TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATT 13015 |||| ||| |||| ||| | || | ||||||||| ||||| || |||||||||||||| Sbjct 77737 TTTTCACATCCTAGTTCCACTAGAAGTCTGTCAGCTACAAATTCAATGTACTGTTTCATC 77796 Query 13016 AAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCT 13075 || | | ||||||||||||||| ||||||| |||||||| | ||| | || ||| Sbjct 77797 AACTTATTGTTCATTCCTATTAAAGCAACAGGCAATGCTTCTGTGAGAAATTCTTGTTCA 77856 Query 13076 ATATCAACTGCTTC-GATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAG 13134 ||| || || || ||| | || | | | | || ||| |||| |||| || Sbjct 77857 ATAGATACGGCATCAGAT-ATAATTTGGGTAACTCTTTTTTCTGATGGTTTATTTACAAG 77915 Query 13135 ATGCTTAAACATCATACATGCAAAATCACAGTGCAATCC 13173 ||| | ||||| | || ||||||||||| ||||| || Sbjct 77916 ATGACTGAACATTAGGCAGGCAAAATCACAATGCAAGCC 77954 Score = 95.1 bits (104), Expect = 1e-14 Identities = 89/111 (80%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 12832 ATCGTCCTTATTTGACATAACAG-ACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAA 12890 ||| ||||| || ||||| || ||| |||| ||||||| | ||| |||| ||||||| Sbjct 76421 ATCCTCCTTTTTAGACATGACTCCACACTTTT-GATATTCTCCGACTTTTTTCTCAAAAA 76479 Query 12891 AGTTTGTTTTTCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT 12941 |||||||||| |||||||| ||||| ||||||||||| || ||||||| Sbjct 76480 AGTTTGTTTTCCCTTCTAAGCTAATATGCTCCATAAAATCAAATGGATTTT 76530 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 ||| |||||||| || | || || |||||||||||||| | |||||| || ||||| || Sbjct 82891 AATGTAAGTATCAATAAGCAAACTGTACATTTCTGAATGGACATTTTCAATTGCTATCTG 82950 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 ||||||||| ||||| | || || | ||||| ||||| Sbjct 82951 GAAACCATAGAAACAGCGGGCTTCAGTAACCTGCACTTC 82989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430621793389506