Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq12019 86.0 5e-12 >seq12019 Length=383594 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 |||||| || | ||||| || | ||| | ||| ||| ||||| ||||| ||||||| Sbjct 132341 ACCTCCTCGAAGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAGA 132400 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| || | || |||| ||||||||| | | || | | |||||||| || Sbjct 132401 TAATGTACGTCCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGG 132460 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTT-GATAGACGCTATGGTATCGGTAGACTCCG 48677 | | |||||||| ||||| ||||| || | |||| ||||| | | ||| Sbjct 132461 AATGCCCTCCTTGTCTTGGATTTT-TGCTTTGACATTTTCTATTGTATCACTGGGCTCAA 132519 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | |||||||||||| || || |||||||| ||||| |||||||| Sbjct 132520 CTTCTAATGTTATGGTTTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| || || ||||| | ||||||||||| ||| ||||| |||||||| ||||||| Sbjct 132797 ACCACCACGTAACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGA 132856 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 ||| ||| | || || | ||||| || | | |||| | ||| || || || Sbjct 132857 CAAGGTTCGACCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGG 132916 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| || || || | | | |||||||| | | |||| Sbjct 132917 AATTCCTTCCTTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCAC 132976 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || |||||||| || || || ||||||||||| |||||||| Sbjct 132977 CTCCAAAGTGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCAT 133024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420898735566653