Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq12019 156 4e-33 >seq12019 Length=383594 Score = 156 bits (172), Expect = 4e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| | |||||| || ||||||| |||||||| ||||| | |||||||| | Sbjct 132570 CCTCCTCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATC--TG 132627 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||||| | ||| |||| ||| ||||| ||||||| | || |||||||| |||| Sbjct 132628 AGAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAG 132687 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| ||||||||||| | |||||| || || || | | || ||| | | || | Sbjct 132688 GAATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTA 132747 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||||||||||||||| ||||| |||||||| |||||||| Sbjct 132748 CCTCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCAT 132796 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||| ||||| |||| ||| ||||| || | |||||| || ||||| | ||| || || Sbjct 131426 CATTCCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTC 131485 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 || ||| | ||| || |||||||| || |||| || | ||| ||||||||||| Sbjct 131486 AGACAGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGG 131545 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 ||| || |||||||| || | |||||||| || || ||| |||||| | || Sbjct 131546 AGGGATTCCTTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTC 131605 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || |||||||| ||||||||||||||||| |||||||| Sbjct 131606 AACTTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 118 bits (130), Expect = 9e-22 Identities = 154/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTC 94857 |||| ||||| || || || ||||| | ||||||||| ||| ||| | ||| || Sbjct 132361 CAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAG--ATAATGTACGTCCATCTTC 132418 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| || || |||| || | ||||||||||| || ||||| || || ||||| | Sbjct 132419 CAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGGAATGCCCTCCTTGTCTTG 132478 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 |||||||| ||||| | | || ||| | | || || || | || |||||||| Sbjct 132479 GATTTTTGCTTTGACATTTTCTATTGTATCACTGGGCTCAACTTCTAATGTTATGGTTTT 132538 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||||||| |||||||||||||| Sbjct 132539 TCCAGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 114 bits (126), Expect = 1e-20 Identities = 173/246 (70%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 94762 TTTTTTAAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTT 94821 |||| |||| ||| || ||||||||||| | | |||||||||| ||| ||||| || Sbjct 131867 TTTTACAAAAATTTGCATACCTCCTCTCAACCTTAGTACCAAGTGCAGAGTCGATTCTTT 131926 Query 94822 TTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAA 94881 || | || || || | ||| |||||| | ||| || || |||| || | Sbjct 131927 CTGAATATTGTAGTCCGATAAAGTACGTCCATCCTCTAACTGCTTCCCTGCAAATATAAG 131986 Query 94882 TCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGAC 94941 ||||| ||||| ||||||||||||||||| || | ||||| || || || | | Sbjct 131987 CCTTTGTTGATCAGGAGGAATACCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCTAT 132046 Query 94942 AGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGAT 95001 || ||| | || || || | ||||| ||||| |||||||||||||| ||||| || Sbjct 132047 TGTATCACTAGGCTCAACTTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAAT 132106 Query 95002 CTGCAT 95007 |||||| Sbjct 132107 CTGCAT 132112 Score = 109 bits (120), Expect = 5e-19 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 || || || | ||| |||||||| || | ||||||||| || || ||| || ||| | Sbjct 132816 ACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACA-AG-GTTCGACCATCTT 132873 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | | || ||||| |||| |||| || || || || |||||||| ||||| ||||| | Sbjct 132874 CTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTGTCTT 132933 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTT 94975 || || || || || | | || ||| | ||| || || || | ||||||||| Sbjct 132934 GGATCTTAGCTTTTACATTTTCAATGGTATCA-CTTGGCTCCACCTCCAAAGTGATGGTT 132992 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||||| |||||||||||||||||||| Sbjct 132993 TTTCCAGTAAGTGTTTTCACAAAGATCTGCAT 133024 Score = 107 bits (118), Expect = 2e-18 Identities = 170/242 (70%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||||||| | | |||||| | |||| ||||||||| || || | Sbjct 132101 AAAAATCTGCATCCCTCCTCGAAGCCTCAACACTAGATGCAGAGTAGATTCTTTCTGAAT 132160 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 |||||| || | ||| ||| | ||| |||| ||| || || |||| || | || Sbjct 132161 GTTATAGTC--TGATAATGTACGCCCATCTTCCAACTGCTTACCAGCAAATATGAGCCTC 132218 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || ||||| || || || ||||| || || | ||||| || || || | | ||| Sbjct 132219 TGTTGATCAGGTGGGATGCCTTCCTTATCTTGGATTTTAGCTTTCACATTTTCAATTGTG 132278 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 ||| | | || || || | || ||||| ||||||||||||||||| |||||||||||| Sbjct 132279 TCACTGGGTTCAACTTCCAATGTAATGGTCTTTCCAGTAAGAGTTTTAACAAAGATCTGC 132338 Query 95006 AT 95007 || Sbjct 132339 AT 132340 Score = 102 bits (112), Expect = 7e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 |||||||| ||||| | ||||| || | | || || || ||| || | ||||| | Sbjct 131688 GTAGATTCTTTTTGAATATTATAGTC--TGAAAGAGTACGACCATCTTCTAATTGTTTAC 131745 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | ||||||| | | |||||||| || ||||| |||||||| || | |||||||| | Sbjct 131746 CAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGGATTTTTGCTT 131805 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | ||| | | |||||| | | || || || | ||| ||||| || |||||||||| Sbjct 131806 TCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTAATGGTCTTGCCAGTAAGAG 131865 Query 94989 TTTTCACAAAGATCTGCAT 95007 |||| ||||| || ||||| Sbjct 131866 TTTTTACAAAAATTTGCAT 131884 Score = 100 bits (110), Expect = 3e-16 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || ||||||| | ||| || | || || || || |||||||| | Sbjct 131115 AAAAATTTGCATGCCACCTCTCAGCCTCAAAACAAGATGTAATGTTGACTCCTTTTGAAT 131174 Query 94828 GTTATAATCGCTCATAGTGTT--GGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||||| || | ||| |||| | ||| || ||||| || || |||| || || || Sbjct 131175 ATTATAGTC--TGATAATGTTCTGCCATCTTCTAGCTGCTTACCAGCAAAAATCAACCTC 131232 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||||||||| |||||||||||||| || | |||||||| || || | | ||| Sbjct 131233 TGCTGATCTGGTGGAATACCTTCTTTATCTTGTATTTTTGCTTTAACATTTTCAATAGTA 131292 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAG 94986 ||| | | ||||| || | ||| || ||||| || | ||| Sbjct 131293 TCACTGGGCTCGACTTCCAACGTTATAGTTTTACCTGCAAG 131333 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 94771 ATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTT 94830 |||||| |||||| | | || || || | |||| |||||||||||| || | ||| Sbjct 125393 ATTTTAATTTCCTCCACGGAGTCTCAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTT 125452 Query 94831 ATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 |||||| | || || ||| || ||||| || || |||| || | | |||||| Sbjct 125453 ATAATCAGAAAGGGTTCTGCCATCTTCAAGCTGCTTGCCAGCAAAAATAAGACGTTGCTG 125512 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGAC 94932 |||||||||||| |||||||| || | ||||||||||| || Sbjct 125513 ATCTGGAGGAATTCCTTCTTTATCTTGGATTTTTGCCTTCAC 125554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447906493303080