Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq17317 176 7e-40 seq15775 118 2e-22 seq593 95.1 2e-15 seq10155 80.6 4e-11 >seq17317 Length=1049140 Score = 176 bits (194), Expect = 7e-40 Identities = 195/260 (75%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||| | | |||||| ||||| || ||||| || ||||| || ||||| Sbjct 117596 GCAAAGCGTCATCGTAAAGTTCTTCGTGATAATATTCAAGGTATTACCAAACCTGCTATT 117537 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| |||||||| ||||| || |||||| | ||||| ||| | |||||||| | | Sbjct 117536 CGCCGTCTTGCTCGTCGAGGTGGTGTAAAGCGTATATCTGGTTTGATTTATGAAGAAACT 117477 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| |||||||| | ||||| | | || || | |||||| | ||| ||||| Sbjct 117476 CGTGGCGTTTTGAAAGTTTTCCTAGAAAATGTGATTCGTGATGCCGTTACCTACACCGAA 117417 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || || || || ||||| || | |||||| | |||||||| |||||||| || ||| Sbjct 117416 CATGCCAAGCGAAAAACTGTGACAGCTATGGATGTTGTCTATGCTTTGAAACGCCAGGGC 117357 Query 16673 CGTAAGATTTATGGTTTTGG 16692 |||| | || ||||| || Sbjct 117356 CGTACTCTGTACGGTTTCGG 117337 >seq15775 Length=179649 Score = 118 bits (130), Expect = 2e-22 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 16442 CATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTG 16501 ||||||| | || ||||||| || || || |||||||||||||| ||| | ||| || Sbjct 128612 CATCGCAAAGTCCTGAGAGATAATATTCAGGGTATCACCAAGCCAGCAATCAGACGTTTG 128671 Query 16502 GCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTT 16561 || | || |||||||| |||||| | || || | ||||||| |||| || | || Sbjct 128672 GCAAGACGAGGTGGAGTAAAGCGTATTTCGGGCCTCATCTATGAGGAGACGCGAGGAGTA 128731 Query 16562 TTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAA 16621 | || | ||| | | | || |||| |||||| | ||| || ||||| || || Sbjct 128732 CTCAAAGTTTTCTTGGAAAATGTAATCCGAGATGCTGTTACCTACACTGAGCATGCCAAG 128791 Query 16622 CGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT 16681 | || |||||||| | |||||| | || |||||||||||| | || || |||| | Sbjct 128792 AGGAAAACTGTCACTGCTATGGATGTAGTATATGCATTGAAAAGACAGGGACGTACTCTG 128851 Query 16682 TATGGTTTTGGAAGTTAA 16699 ||||| || || ||||| Sbjct 128852 TATGGATTCGGTGGTTAA 128869 Score = 114 bits (126), Expect = 2e-21 Identities = 180/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 16442 CATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTG 16501 ||||||| | || ||||||| || || || |||||||||||||| ||| | ||| || Sbjct 124663 CATCGCAAAGTCCTGAGAGATAATATTCAGGGTATCACCAAGCCAGCAATCAGACGTTTG 124722 Query 16502 GCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTT 16561 || | | | |||||| |||||| | || || | ||||||| |||| || | ||| Sbjct 124723 GCAAGACAAGATGGAGTAAAGCGTATTTCGGGCCTCATCTATGAGGAGACGCGAGGAGTT 124782 Query 16562 TTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAA 16621 | || | ||| | | | || |||| |||||| | ||| || ||||| || || Sbjct 124783 CTCAAAGTTTTCTTGGAAAATGTAATCCGAGATGCTGTTACCTACACTGAGCATGCCAAG 124842 Query 16622 CGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT 16681 | || |||||||| | |||||| | || |||||||||||| | || || |||| | Sbjct 124843 AGGAAAACTGTCACTGCTATGGATGTAGTATATGCATTGAAAAGACAGGGACGTACTCTG 124902 Query 16682 TATGGTTTTGGAAGTTAA 16699 ||||| || || ||||| Sbjct 124903 TATGGATTCGGTGGTTAA 124920 >seq593 Length=266203 Score = 95.1 bits (104), Expect = 2e-15 Identities = 179/261 (69%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 16442 CATCGCAGATCTCTTCGAGATAACATCCA--AG-GAATCACCAAGCCAGCTATCCGTCGT 16498 ||||||| | || ||||||| || || || | |||||||||||||| ||| ||| Sbjct 85100 CATCGCAAAGTCCTAAGAGATAATATTCAGCAGCGTATCACCAAGCCAGCAATCAAACGT 85159 Query 16499 CTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGAT 16558 || | | || |||||||| |||||| | || || | |||||||| |||| | | Sbjct 85160 TTGACAAGACGAGGTGGAGTAAAGCGTATTTCGGGCCTCGTCTATGAGGAGACGCAAGGA 85219 Query 16559 GTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCT 16618 || | || | ||| | | | || || | |||||| | ||| || ||||| | Sbjct 85220 GTACTCAAAGTTTTCTTGGAAAATGTAATTCGAGATGCTGTTACCTACACTGAGCATACC 85279 Query 16619 AAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAG 16678 ||| | || |||||||| | |||||| | || |||||||||||| | || || |||| Sbjct 85280 AAAAGGAAAACTGTCACTGCTATGGATGTAGTATATGCATTGAAAAGACAGGGACGTACT 85339 Query 16679 ATTTATGGTTTTGGAAGTTAA 16699 | ||||| || || ||||| Sbjct 85340 TTGTATGGATTCGGTGGTTAA 85360 >seq10155 Length=92119 Score = 80.6 bits (88), Expect = 4e-11 Identities = 175/259 (68%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 16442 CATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCT 16500 ||||||| | |||| ||||||||||||| |||||| | || || || | | ||| | Sbjct 57296 CATCGCA-AGGTCTTAAGAGATAACATCCAGGGAATCTCTAAACCCGCATTTAGGCGTTT 57238 Query 16501 GGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGT 16560 ||| | || ||| | || |||||| | || || | ||||||| |||| || | | Sbjct 57237 GGCAAGACGAGGTAGTGTAAAGCGTATTTCAGGCCTCATCTATGAGGAGACGCGAGGAGC 57178 Query 16561 TTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAA 16620 | || | ||||| | | ||||||| ||| | | |||| |||| || || Sbjct 57177 ACTTAAAGTTTTCCTGGAAAATGTTATCCGAGATACAGTTACCTAT----AGCATGCAAA 57122 Query 16621 ACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGAT 16680 | | || |||||||| |||||||| | || ||||| ||||| | || || |||| | Sbjct 57121 AAGGAAAACTGTCACTGCCATGGATGTTGTTTATGCGTTGAAGAGACAGGGACGTACTCT 57062 Query 16681 TTATGGTTTTGGAAGTTAA 16699 || || ||||| ||||| Sbjct 57061 GTACGGATTTGGTGGTTAA 57043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79012430081529