Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq3821 125 8e-24 >seq3821 Length=102291 Score = 125 bits (138), Expect = 8e-24 Identities = 115/144 (80%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 21490 ATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCC 21549 ||||| |||| |||| | |||||| |||||||| |||||| | || |||||||| || Sbjct 78305 ATGCATACCT-CATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACC 78363 Query 21550 TCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGC 21609 |||||| || | ||| ||||| || ||||||| || |||||||| || || || || || Sbjct 78364 TCTCTTCTTCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGC 78423 Query 21610 AGCAAATGCAACTAATCGTTCACC 21633 |||||||||||| | ||||||||| Sbjct 78424 AGCAAATGCAACGATTCGTTCACC 78447 Score = 125 bits (138), Expect = 8e-24 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 21861 CCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAA 21920 |||| |||||||| || || |||||||| || ||||||||||| || || | | |||| Sbjct 84874 CCAAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAA 84933 Query 21921 AATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTT 21980 | | ||| | |||| |||| ||||||| || |||||||||||| || |||| Sbjct 84934 AGTGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACTT 84993 Query 21981 CTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATA 22040 |||||| ||||| || ||| ||||||||||||||| ||| ||||| | ||| Sbjct 84994 CTTCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACT 85053 Query 22041 TTATTGGAAATATTACAAACCT 22062 || |||||||||||||| || Sbjct 85054 CAATGGGAAATATTACAAATCT 85075 Score = 109 bits (120), Expect = 6e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 21127 TTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTT 21186 ||||||||| |||||||||| |||| | ||| || ||||| ||||| | ||| || Sbjct 76391 TTAAAAATCTGCATCTAATGTGAAACGGTGATCCTCCTTTTTAGACATGACTCCACACTT 76450 Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246 |||||| || | ||| |||| || ||||| ||||| || ||||| || ||| || Sbjct 76451 TTGATATTCTCCGACTTTTTTCTCAAAAAAGTTTGTTTTCCCTTCTAAGCTAATATGCTC 76510 Query 21247 CATAAAATCAAATGGATTTTCAGATTTAAATAT 21279 |||||||||||||||||||||| ||| |||| Sbjct 76511 CATAAAATCAAATGGATTTTCAACATTATATAT 76543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531444342679720