Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq12019 116 4e-21 >seq12019 Length=383594 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | || |||||| |||| || | ||| | || | | Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || ||| ||| || || |||||||| || ||||| ||||| Sbjct 131596 GACACCATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATCAG 131537 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||||| |||| | || ||||| || ||||||| | | | ||||| ||| Sbjct 131536 CAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAAC 131477 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||||||||| |||||| | ||| |||| ||||| | ||||| |||| Sbjct 131476 ATTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATTAAGAGGTGGAA 131428 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26784 AAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAA 26843 |||| ||| | || || |||| || | ||| | ||| ||| ||||| || || | Sbjct 125614 AAAATATTTGCAGGTAAGACGATAACTCTTGAAGTGGAACCAAGTGACACAATAGAAAAT 125555 Query 26844 GTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTAC 26903 || || ||| || || |||||||| || ||||| ||||| ||| | || |||| Sbjct 125554 GTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAACGTCTTATTTTT 125495 Query 26904 GGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCT 26963 | ||||| || || ||||||| |||| | | || ||||||||||| || |||||| Sbjct 125494 GCTGGCAAGCAGCTTGAAGATGGCAGAACCCTTTCTGATTATAACATTCAGAAGGAATCT 125435 Query 26964 ACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998 ||| | ||||| || |||||||| | |||||||| Sbjct 125434 ACTCTGCATCTTGTTCTGAGACTCCGTGGAGGAAA 125400 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||||||||| | ||||| || | || || | || |||| | | Sbjct 131884 ATGCAAATTTTTGTAAAAACTCTTACTGGCAAGACCATTACGTTAGAGGTAGAGCCCAGT 131825 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| || | || ||| ||| || || |||||||| || || || ||||| Sbjct 131824 GACACCATTGAAAACGTGAAAGCAAAAATCCAGGATAAAGAAGGCATTCCACCTGATCAG 131765 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | | || |||||| | ||||||| | | | | |||||||| Sbjct 131764 CAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCAGACTATAAT 131705 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||||| | ||||| ||||| || ||||| ||||| Sbjct 131704 ATTCAAAAAGAATCTACCCTTCATCTAGTCCTAAGGCTTAGGGGAGG 131658 Score = 102 bits (112), Expect = 8e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||||||||| | ||||| |||||| | ||||||||| | ||||| | || | || | Sbjct 133028 CAAAATGCAGATCTTTGTGAAAACACTTACTGGAAAAACCATCACTTTGGAGGTGGAGCC 132969 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || ||||| || | || ||| ||||| ||||| ||||| || ||||| || Sbjct 132968 AAGTGATACCATTGAAAATGTAAAAGCTAAGATCCAAGACAAGGAAGGAATTCCTCCTGA 132909 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||||| || || || | | || || ||| | ||||||| | ||| | | || || Sbjct 132908 CCAACAGAGGCTAATATTTGCAGGAAAGCAATTAGAAGATGGTCGAACCTTGTCTGATTA 132849 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAG 26983 ||||||||| || ||||| ||| | ||| | ||||| || Sbjct 132848 TAACATTCAGAAGGAATCCACTCTTCATTTAGTCCTCAG 132810 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| ||||| | |||||||| | || || | ||| | ||| | | Sbjct 132340 ATGCAGATCTTTGTTAAAACTCTTACTGGAAAGACCATTACATTGGAAGTTGAACCCAGT 132281 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| || || || || ||||| || || || |||||| Sbjct 132280 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGATAAGGAAGGCATCCCACCTGATCAA 132221 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || || ||||| | | || || || | ||||||| | | | | | | |||||||| Sbjct 132220 CAGAGGCTCATATTTGCTGGTAAGCAGTTGGAAGATGGGCGTA-CATTATCAGACTATAA 132162 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||| |||||||||||| | ||||| || |||| ||| ||||||| Sbjct 132161 CATTCAGAAAGAATCTACTCTGCATCTAGTGTTGAGGCTTCGAGGAGG 132114 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || || | ||||||||| | ||||| | || ||||| | | Sbjct 132796 ATGCAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGT 132737 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || ||| || ||| ||||||||||| || ||||| ||||| Sbjct 132736 GATACAATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 132677 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||| || | | || || || | ||||||| | | || || ||||| Sbjct 132676 CAGCGACTTATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACACTCTCAGATTATAAT 132617 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||||||||| | || | || || ||||||||||||| Sbjct 132616 ATTCAAAAAGAATCTACCCTGCACTTAGTTTTGCGACTTAGAGGAGG 132570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478251629878160