Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq12019 132 4e-26 >seq12019 Length=383594 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | || |||||| ||||||| | ||||| ||| | | Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || ||| ||| || || |||||||| || ||||| ||||| Sbjct 131596 GACACCATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATCAG 131537 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||||| |||| | || || || || ||||||| | | | | || || ||| Sbjct 131536 CAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAAC 131477 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||||||||||| ||||| ||||||| || || ||||| ||||| ||| Sbjct 131476 ATTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATTAAGAGGTGGA 131429 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | ||||| |||||| | ||||||||| | || || | || || ||| | Sbjct 133028 CAAAATGCAGATCTTTGTGAAAACACTTACTGGAAAAACCATCACTTTGGAGGTGGAGCC 132969 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | || ||||| || | || ||| ||||| ||||| ||||| || ||||| || Sbjct 132968 AAGTGATACCATTGAAAATGTAAAAGCTAAGATCCAAGACAAGGAAGGAATTCCTCCTGA 132909 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||||| || || | | || |||||| | ||||||| ||| | | ||||| Sbjct 132908 CCAACAGAGGCTAATATTTGCAGGAAAGCAATTAGAAGATGGTCGAACCTTGTCTGATTA 132849 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 ||||||||| || ||||| || |||||||||| Sbjct 132848 TAACATTCAGAAGGAATCCACTCTTCATTTAGT 132816 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||||||||| | ||||| || | ||||| | || || ||| ||| Sbjct 131884 ATGCAAATTTTTGTAAAAACTCTTACTGGCAAGACCATTACGTTAGAGGTAGAGCCCAGT 131825 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || ||| ||| || || ||||||||||| || || ||||| Sbjct 131824 GACACCATTGAAAACGTGAAAGCAAAAATCCAGGATAAAGAAGGCATTCCACCTGATCAG 131765 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | || || ||| | ||||||| | | | || ||||| Sbjct 131764 CAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCAGACTATAAT 131705 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||||||||| ||||| |||| |||| | || ||||| Sbjct 131704 ATTCAAAAAGAATCTACCCTTCATCTAGTCCTAAGGCTTAGGGGAGG 131658 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||||||| | || || | || || || ||| Sbjct 132796 ATGCAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGT 132737 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || ||| || ||| ||||||||||| || ||||| ||||| Sbjct 132736 GATACAATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 132677 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTATAA 24169 ||| |||| || | | || ||||| | ||||||| || | || || |||||||| Sbjct 132676 CAGCGACTTATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACAC-TCTCAGATTATAA 132618 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||||||||||||| | || ||||| || || | |||||||| Sbjct 132617 TATTCAAAAAGAATCTACCCTGCACTTAGTTTTGCGACTTAGAGGAGG 132570 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | |||||||| | ||||| | ||||| || ||| Sbjct 132340 ATGCAGATCTTTGTTAAAACTCTTACTGGAAAGACCATTACATTGGAAGTTGAACCCAGT 132281 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || ||| || || || || |||||||| || || |||||| Sbjct 132280 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGATAAGGAAGGCATCCCACCTGATCAA 132221 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||||| || || | | || ||||| | ||||||| | || | | | || ||||| Sbjct 132220 CAGAGGCTCATATTTGCTGGTAAGCAGTTGGAAGATGGGCG-TACATTATCAGACTATAA 132162 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 |||||| ||||||||||| | ||| ||||||| || | ||||||| Sbjct 132161 CATTCAGAAAGAATCTACTCTGCATCTAGTGTTGAGGCTTCGAGGAGG 132114 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| ||||| | ||||||||| | || || | ||||| ||| ||| Sbjct 132568 ATGCAGATCTTTGTTAAAACTCTTACTGGAAAAACCATAACATTAGAAGTTGAGCCCAGT 132509 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | |||||| ||| || ||||| || ||||| || |||||||| Sbjct 132508 GATACAATAGAAAATGTCAAAGCAAAAATCCAAGACAAGGAGGGCATTCCACCCGATCAG 132449 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || || || || | | || ||||| | ||||||| | | | | | | |||||||| Sbjct 132448 CAAAGGCTTATATTTGCTGGTAAGCAGTTGGAAGATGGACGTA-CATTATCTGATTATAA 132390 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| |||||||| || ||| | ||| | || |||| | ||||||| Sbjct 132389 CATCCAAAAAGAGTCAACATTGCATCTTGTTCTAAGGCTTCGAGGAGG 132342 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24006 AAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAA 24065 |||| ||| | || || |||| || | ||||| || | | ||||| || || | Sbjct 125614 AAAATATTTGCAGGTAAGACGATAACTCTTGAAGTGGAACCAAGTGACACAATAGAAAAT 125555 Query 24066 GTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTAC 24125 || || ||| || || |||||||| || ||||| ||||| || | || |||| Sbjct 125554 GTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAACGTCTTATTTTT 125495 Query 24126 GGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCT 24185 | |||||||| || ||||||| ||||| | | |||||||||||||| || |||||| Sbjct 125494 GCTGGCAAGCAGCTTGAAGATGGCAGAACCCTTTCTGATTATAACATTCAGAAGGAATCT 125435 Query 24186 ACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || | ||| | || | ||| | | |||||| Sbjct 125434 ACTCTGCATCTTGTTCTGAGACTCCGTGGAGGA 125402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429576268921215