Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq12019 140 2e-28 seq3854 136 3e-27 seq15180 116 2e-21 seq10168 116 2e-21 seq6522 116 2e-21 seq44 116 2e-21 seq22282 107 1e-18 seq5266 107 1e-18 seq19490 105 4e-18 seq11014 104 2e-17 seq18850 98.7 7e-16 seq17631 93.3 3e-14 seq2911 93.3 3e-14 seq16163 89.7 3e-13 seq9693 87.8 1e-12 seq21473 86.0 4e-12 seq18499 82.4 5e-11 >seq12019 Length=383594 Score = 140 bits (154), Expect = 2e-28 Identities = 171/232 (74%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||| || | ||| |||||||||||||| ||| |||||||| ||||| | Sbjct 131426 CATT-CCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGT 131484 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||||| | ||| | || || | ||||| || ||||| || || | || ||||| | Sbjct 131485 CAGACAGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTG 131544 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| |||||||| || |||||| || ||||| | || || || | | | Sbjct 131545 GAGGGATTCCTTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCT 131604 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||||||||||| ||||| || || | |||||||| || |||||||| Sbjct 131605 CAACTTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| |||||||| | | ||||| || ||||| || || ||||||||||| || | Sbjct 131884 TACCTCCTCTCAACCTTAGTACCAAGTGCAGAGTCGATTCTTTCTGAATATTGTAGTCCG 131943 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | ||| |||| | || ||||| || || || |||||||| || | ||||||||| | | Sbjct 131944 ATAAAGTACGTCCATCCTCTAACTGCTTCCCTGCAAATATAAGCCTTTGTTGATCAGGAG 132003 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | |||||||| ||| ||||| || ||||| | | ||||| | | |||| Sbjct 132004 GAATACCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCTATTGTATCACTAGGCTCAA 132063 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| || ||||||||||| || | ||||| || || |||||||| Sbjct 132064 CTTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATCTGCAT 132112 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| | ||||| || || || || || || ||||||||||| ||||| | Sbjct 132568 TACCTCCTCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTG 132627 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | |||| | || || || || ||||| ||||| || || || || ||||| | | Sbjct 132628 AGAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAG 132687 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| |||||| || ||||| | | ||||| | ||| | Sbjct 132688 GAATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTA 132747 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || ||||| || |||| || ||||| ||||||||||| Sbjct 132748 CCTCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCAT 132796 Score = 100 bits (110), Expect = 2e-16 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168 || |||||||||||| ||||| ||||| || ||||||||||| || | || ||| Sbjct 132816 ACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCATCTTCT 132875 Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228 ||||| ||||| ||||||||||| | ||||| || | || | ||||| ||||| Sbjct 132876 AATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGG 132935 Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTT---TCAACTTCTAATGTAATAGTT 38285 || || || ||||| | | |||| ||||| || || || || || || ||| Sbjct 132936 ATCTTAGCTTTTACATTTTCAATGGTAT---CACTTGGCTCCACCTCCAAAGTGATGGTT 132992 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||||||| || |||||||| || Sbjct 132993 TTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 98.7 bits (108), Expect = 7e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 38126 CTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAA 38185 ||| ||||| || || |||||||| || |||| | || || || || || || ||||| Sbjct 132377 CTCTTTTTGGATGTTATAATCAGATAATGTACGTCCATCTTCCAACTGCTTACCAGCAAA 132436 Query 38186 TATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 ||| || | ||| ||||||| || | ||| || ||||| |||||| || ||||| Sbjct 132437 TATAAGCCTTTGCTGATCGGGTGGAATGCCCTCCTTGTCTTGGATTTTTGCTTTGACATT 132496 Query 38246 CTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | | ||||| | |||||||||||||| || ||||| || || | ||||| || Sbjct 132497 TTCTATTGTATCACTGGGCTCAACTTCTAATGTTATGGTTTTTCCAGTAAGAGTTTTAAC 132556 Query 38306 GAATATCTGCAT 38317 || |||||||| Sbjct 132557 AAAGATCTGCAT 132568 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||| || || ||||||||||| || || || | | ||| | || |||||||| Sbjct 131681 ATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCTAATTG 131740 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 ||| || ||||| || || || || ||||| | || | ||||||||| ||| ||||| Sbjct 131741 TTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGGATTTT 131800 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGT 38293 | ||||| || | | || || | || || ||||| ||||| || || || || Sbjct 131801 TGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTAATGGTCTTGCCAGT 131860 Query 38294 CAAGGTTTTCACGAATATCTGCAT 38317 | ||||| || || || ||||| Sbjct 131861 AAGAGTTTTTACAAAAATTTGCAT 131884 >seq3854 Length=84955 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 67748 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGAAGGAATCTCGT 67689 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 67688 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 67654 >seq15180 Length=194556 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | Sbjct 27264 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCAC 27323 Query 20007 GGTAATATTTAGCCTTA 20023 || | |||||||||||| Sbjct 27324 GGCAGTATTTAGCCTTA 27340 >seq10168 Length=76936 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | Sbjct 45263 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCAC 45322 Query 20007 GGTAATATTTAGCCTTA 20023 || | |||||||||||| Sbjct 45323 GGCAGTATTTAGCCTTA 45339 >seq6522 Length=20326 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | Sbjct 790 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCAC 731 Query 20007 GGTAATATTTAGCCTTA 20023 || | |||||||||||| Sbjct 730 GGCAGTATTTAGCCTTA 714 >seq44 Length=64502 Score = 116 bits (128), Expect = 2e-21 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | Sbjct 14222 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGGTCTCAC 14163 Query 20007 GGTAATATTTAGCCTTA 20023 || | |||||||||||| Sbjct 14162 GGCAGTATTTAGCCTTA 14146 >seq22282 Length=56129 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| | Sbjct 3765 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTGCTATTGGTCTCAC 3706 Query 20007 GGTAATATTTAGCCTTA 20023 || | |||||||| ||| Sbjct 3705 GGCAGTATTTAGCTTTA 3689 >seq5266 Length=403181 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||| | Sbjct 40722 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACAGTACTTGTTTGCTATTGGTCTCAC 40663 Query 20007 GGTAATATTTAGCCTTA 20023 || | |||||||||||| Sbjct 40662 GGCAGTATTTAGCCTTA 40646 >seq19490 Length=348994 Score = 105 bits (116), Expect = 4e-18 Identities = 70/78 (90%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 19946 TCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 ||||||||||||||||||||| ||||||| |||||| ||||||||| ||||| |||||| Sbjct 223093 TCTCTCTCTTCAAAGTTCTTTGCAACTTTTCCTCACAGTACTTGTTTGCTATTGGTCTCA 223152 Query 20006 CGGTAATATTTAGCCTTA 20023 ||| | |||||||||||| Sbjct 223153 CGGCAGTATTTAGCCTTA 223170 >seq11014 Length=44665 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 || ||||||||||||||||| |||||||||||||||| ||||||| ||||||||| || | Sbjct 4267 CTTTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGCACTTGTTTGCTATCGGTTTCAC 4208 Query 20007 GGTAATATTTAGCCTTA 20023 || | |||||||||||| Sbjct 4207 GGCAGTATTTAGCCTTA 4191 >seq18850 Length=1191492 Score = 98.7 bits (108), Expect = 7e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| ||||||||||||||||||||| || |||||||||| Sbjct 1164911 CTCTCTCTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTCTTTGCTATCGGTCAACG 1164852 Query 20007 GGTAATATTTAGCCTTA 20023 |||| || ||||||||| Sbjct 1164851 GGTAGTACTTAGCCTTA 1164835 >seq17631 Length=180689 Score = 93.3 bits (102), Expect = 3e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 19947 CTCTCTCTT-CAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||| |||| ||||||||||| |||||||||||||||||||||||| ||||| ||||| Sbjct 84119 CTCTGTCTTTCAAAGTTCTTTGCAACTTTCCCTCACGGTACTTGTTTACTATCTGTCTCA 84060 Query 20006 CGGTAATATTTAGCCTTA 20023 ||| | |||||||| ||| Sbjct 84059 CGGCAGTATTTAGCTTTA 84042 >seq2911 Length=412390 Score = 93.3 bits (102), Expect = 3e-14 Identities = 68/78 (87%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAA-GTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||||| |||||| |||| || |||||||||||||||||||||||| ||||||| | || Sbjct 68695 CTCTCTTTTCAAAAGTTCATTGCAACTTTCCCTCACGGTACTTGTTTGCTATCGTTTTCA 68636 Query 20006 CGGTAATATTTAGCCTTA 20023 ||| | |||||||||||| Sbjct 68635 CGGCAGTATTTAGCCTTA 68618 >seq16163 Length=303110 Score = 89.7 bits (98), Expect = 3e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 19955 TCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATAT 20014 |||||||||||| |||||||| |||||||||||||| |||||||||||| || | ||| Sbjct 27849 TCAAAGTTCTTTGCAACTTTCTGTCACGGTACTTGTTTGCTATCGGTCTCATGGCAGTAT 27790 Query 20015 TTAGCCTTA 20023 ||||||||| Sbjct 27789 TTAGCCTTA 27781 Score = 89.7 bits (98), Expect = 3e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 19955 TCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATAT 20014 |||||||||||| |||||||| |||||||||||||| |||||||||||| || | ||| Sbjct 29431 TCAAAGTTCTTTGCAACTTTCTGTCACGGTACTTGTTTGCTATCGGTCTCATGGCAGTAT 29372 Query 20015 TTAGCCTTA 20023 ||||||||| Sbjct 29371 TTAGCCTTA 29363 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 19955 TCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATAT 20014 |||||||||||| |||||||| |||||||||||||| |||||||||||| | | ||| Sbjct 27035 TCAAAGTTCTTTGCAACTTTCTGTCACGGTACTTGTTTGCTATCGGTCTCATAGCAGTAT 26976 Query 20015 TTAGCCTTA 20023 ||||||||| Sbjct 26975 TTAGCCTTA 26967 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 19955 TCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATAT 20014 |||||||||||| |||||||| |||||||||||||| |||||||||||| | | ||| Sbjct 298717 TCAAAGTTCTTTGCAACTTTCTGTCACGGTACTTGTTTGCTATCGGTCTCATAGCAGTAT 298776 Query 20015 TTAGCCTTA 20023 ||||||||| Sbjct 298777 TTAGCCTTA 298785 >seq9693 Length=965511 Score = 87.8 bits (96), Expect = 1e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||||| |||||| | |||| |||||||||||||| ||||||||| ||||| |||||| | Sbjct 195093 TCTCTTTTCAAAATACTTTGCAACTTTCCCTCACAGTACTTGTTTGCTATTGGTCTCACA 195152 Query 20008 GTAATATTTAGCCTTA 20023 | | |||||||||||| Sbjct 195153 GCAGTATTTAGCCTTA 195168 >seq21473 Length=890527 Score = 86.0 bits (94), Expect = 4e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||| ||||||| || | ||||||||| |||||||||||| | Sbjct 151282 CTCTCTCTTCAAAGTTCTTTGAAACTTTCTTTCGCAGTACTTGTTTGCTATCGGTCTCAC 151223 Query 20007 GGTAATATTTAGCCTTA 20023 || | |||||| | ||| Sbjct 151222 GGCAGTATTTAACTTTA 151206 >seq18499 Length=602918 Score = 82.4 bits (90), Expect = 5e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 19951 CTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTA 20010 |||||||||||||||| || || | ||||| |||||||| |||||||||||| ||| | Sbjct 323496 CTCTTCAAAGTTCTTTGGAAATTATCTTCACGTTACTTGTTTGCTATCGGTCTCACGGCA 323437 Query 20011 ATATTTAGCCTTA 20023 |||||||||||| Sbjct 323436 GTATTTAGCCTTA 323424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334666946851643