Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3821 138 1e-27 seq15467 109 7e-19 >seq3821 Length=102291 Score = 138 bits (152), Expect = 1e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 |||||||||||||| || || ||||| ||||||||||| || || | ||| ||||| Sbjct 84876 AAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAAAG 84935 Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 33164 | ||||| || || ||| || | |||||| | |||||| |||| || |||||| Sbjct 84936 TGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACTTCT 84995 Query 33165 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 33224 || | ||||| || || || || |||||||||||||| | ||| || || ||||| | | Sbjct 84996 TCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACTCA 85055 Query 33225 ATTGGAAAAATAACAAATCTA 33245 || ||||| || ||||||||| Sbjct 85056 ATGGGAAATATTACAAATCTA 85076 Score = 129 bits (142), Expect = 7e-25 Identities = 162/220 (74%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| |||| ||| || ||||| ||| ||| || || || ||||||| || | ||| | Sbjct 78312 CCTCATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACCTCTCTTCT 78371 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| |||||||| |||||||| ||||||||||| ||||||||||| || ||||| | Sbjct 78372 TCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGCAGCAAATG 78431 Query 32803 CAATAAGTCTCTCTCCATAACCGGC--GC-TGTCATGTATCCACTTTTGAGCCCAATCGG 32859 ||| | || || ||| | || || | | || ||||| || ||||||||| | Sbjct 78432 CAACGATTCGTTCACCAAAGGATGCATGCGTATGATTAATCCAATTCAAAGCCCAATCAG 78491 Query 32860 CCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 32899 | ||||| || ||||| | | || || |||||||| || Sbjct 78492 CTTTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAA 78531 >seq15467 Length=153806 Score = 109 bits (120), Expect = 7e-19 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 63811 ACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAAT 63870 ||||||| |||||||| ||||| || |||||||||| ||| || | || || || || Sbjct 143694 ACTAAATGACTTTTTTGTCTCTTTATGCAGATTTGATATGGCAATGCGTGCAGCAAGGAT 143753 Query 63871 GGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAA 63930 ||||||||| ||||||| |||||| ||| ||||| ||||| || |||| | || | Sbjct 143754 GGCATAATCAGGATGTTTTGTAGTCATAGTCGCTGCAATTTCTGCAGCCAAGTTATCAAG 143813 Query 63931 TTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || ||||| |||||| ||| | || | || || ||||| Sbjct 143814 TTCAACAGTTGTAACACCAGGATACAAGCCATTTATGACTTTCAT 143858 Score = 105 bits (116), Expect = 8e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 || |||||||| |||||||| |||| |||||||||||||| | |||||| ||| Sbjct 76390 ATTTCAGTGCATAGATTACTGCACTGTATGGTTCCTAAATTCTTTTGATTTGATTTTCGA 76449 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 ||||| ||||| ||||| | || |||| || || ||||||||||||||||| ||||| Sbjct 76450 TTACAAGCATCTTTATACAACATATATGGGGTTCCTGTTTCAATCTGAGATTCAATAATT 76509 Query 62921 GCTTTCCA 62928 || | ||| Sbjct 76510 GCATACCA 76517 Score = 102 bits (112), Expect = 1e-16 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 ||| |||||||| ||||| || || |||| ||| || | |||||| || || || || | Sbjct 63800 TACCTGAAATTCCCCAGATAAAACCCTCCTAGTATAGAAATTACTAGTGTATGGCTCTAT 63859 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 ||| ||||||||||| | |||||| |||||||| || || |||||||| || || | || Sbjct 63860 AGATTCATTATTTCCAAGAATTTGCGCAGTTGAAGCTGTTGGCATAGGGGCTACAAGCAA 63919 Query 62311 ACTATTTCT 62319 ||| || || Sbjct 63920 ACTGTTCCT 63928 Score = 102 bits (112), Expect = 1e-16 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 62983 ATACAATCGTTCGAACTCGTCTCCCCAAACATTG-TCCAGTCCAGGACATTCATCCGGAC 63041 ||||||| ||| || || || ||||| |||| | ||||| || |||||| |||| Sbjct 76864 ATACAATTCTTCAAATTCCTCCCCCCAG-CATTCATGAAGTCCTGGTGATTCATTTGGAC 76922 Query 63042 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63101 |||| || |||| | |||| | | |||||||||||||| | ||| |||||||| | Sbjct 76923 ACATTAAACTCCACATTTCGTCCTTTTCTACTCGTTTCATAAATAAATCTGGAATCCACA 76982 Query 63102 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63161 || ||| |||||||||| || || || || || || |||||||| || | ||| | Sbjct 76983 ATGCATAAAACAGATCTCTGGCCCTCTGCTCTTCTTTGCCAGTATTCTTCTTTAAATCTA 77042 Query 63162 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 63216 || | | || || | |||||| || || || || || || | | ||||||| Sbjct 77043 AAAAGTCAAATATGTCTGCATGCCAAGGCTCTAAATAAATTGCAAAAGCTCCAGG 77097 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/100 (81%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || ||||| || || ||| || |||||||| || |||||||| |||||||| ||||| Sbjct 102945 CCAATTCCTCCAGCAGATTTTGAAATTAATGCACAACGTTTTAAAGTATCATAAATGCCT 103004 Query 63410 TCTATACTATCATCCATCAT-GTTAAGTAGAAAACAGCTA 63448 |||||||| || || |||| |||||| |||||||||||| Sbjct 103005 TCTATACTGTCTTCAGTCATTGTTAAG-AGAAAACAGCTA 103043 Score = 86.0 bits (94), Expect = 8e-12 Identities = 121/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 61918 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 61977 |||||| ||||| ||||| || |||| ||| |||| | || || || || || | ||| Sbjct 55141 CCATCCATAAAAGTGCATGCTTGTTAATTTTCCATAATTTGGTTCAGCAATGTGAACATT 55200 Query 61978 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTT 62037 | ||| ||||||||||| || | || || || || ||||||||||||| || | || Sbjct 55201 TAGAGACTGACTTTGATCTATATAAGCACCTCTATCAGCAGCCATTTTTAAGATATTTTT 55260 Query 62038 TTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 || || || ||||||| || ||| | | ||| | ||| || |||| Sbjct 55261 CTGCGGTATCTCCCAAACTGTACGATATAATTTCTTGAGATCATCAGGAA 55310 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 63466 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATT 63525 |||||| | ||| || | ||| ||||| || ||||||||||| |||||||| | || || Sbjct 107176 AGTTCCAGAATTGAAGAGGGTTGGAGATGCATGAGTAAACCACTTTTCAGACAATAAATG 107235 Query 63526 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63585 || ||||||||||||| || || || ||| || || || || || ||||| | Sbjct 107236 ATATGTCTCAATAGCTGCATCAATGTCATCACCATGTATACCAACAGCAACTCGCATAAG 107295 Query 63586 CATGTGCTGAGGTCTTTCAAC 63606 ||| || || |||| ||||| Sbjct 107296 CATATGTTGCGGTCGCTCAAC 107316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633088240778800