Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq12019 158 1e-33 >seq12019 Length=383594 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| |||||||| ||| | || || || |||| || | || || ||| | | Sbjct 131884 ATGCAAATTTTTGTAAAAACTCTTACTGGCAAGACCATTACGTTAGAGGTAGAGCCCAGT 131825 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| ||||||| || |||||||| ||||||||||| || Sbjct 131824 GACACCATTGAAAACGTGAAAGCAAAAATCCAGGATAAAGAAGGCATTCCACCTGATCAG 131765 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| |||| ||||| || |||||||||||||||| ||| ||| | || || ||| Sbjct 131764 CAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCAGACTATAAT 131705 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||| || || ||| |||| |||||||| || ||||| Sbjct 131704 ATTCAAAAAGAATCTACCCTTCATCTAGTCCTAAGGCTTAGGGGAGG 131658 Score = 127 bits (140), Expect = 2e-24 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||| |||||| |||| || ||| ||||||| | || || || | | Sbjct 132796 ATGCAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGT 132737 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| ||| ||||||||||| ||||| ||||| Sbjct 132736 GATACAATTGAA--AATGTAAAAGCTAAAATTCAA-GACAAAGAAGGAATTCCTCCTGAT 132680 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| |||| ||||| || || || || ||||||| || || | ||||| Sbjct 132679 CAGCAGCGACTTATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACACTCTCAGATTAT 132620 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||||| || || || ||||| | | || |||||||| Sbjct 132619 AATATTCAAAAAGAATCTACCCTGCACTTAGTTTTGCGACTTAGAGGAGG 132570 Score = 125 bits (138), Expect = 6e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| || || | || || ||| ||||||| | || |||||| | Sbjct 133025 AATGCAGATCTTTGTGAAAACACTTACTGGAAAAACCATCACTTTGGAGGTGGAGCCAAG 132966 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||| || || || | || |||| || | || ||||| ||||| ||||| ||||| Sbjct 132965 TGATACCATTGAA--AATGTAAAAGCTAAGATCCAA-GACAAGGAAGGAATTCCTCCTGA 132909 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||||| || | || ||||| || || ||||||||||||| ||| || || ||||| Sbjct 132908 CCAACAGAGGCTAATATTTGCAGGAAAGCAATTAGAAGATGGTCGAACCTTGTCTGATTA 132849 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || |||||||| || |||||||| || ||| || | || || Sbjct 132848 TAACATTCAGAAGGAATCCACTCTTCATTTAGTCCTCAGGTTACGTGGTGG 132798 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| | || |||||| | ||||| | ||||| ||| | | Sbjct 132112 ATGCAGATTTTTGTTAAAACTCTTACTGGTAAAACTATCACTTTAGAAGTTGAGCCTAGT 132053 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || || | || |||| |||| || || |||||||| ||||| ||||| Sbjct 132052 GATACAATAGAA--AATGTTAAAGCTAAAATCCAG-GATAAAGAAGGTATTCCTCCTGAT 131996 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || |||| ||||| || || || ||||| |||| || ||| | || ||| Sbjct 131995 CAACAAAGGCTTATATTTGCAGGGAAGCAGTTAGAGGATGGACGTACTTTATCGGACTAC 131936 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| |||||||| || || || || || |||||| | |||||||| Sbjct 131935 AATATTCAGAAAGAATCGACTCTGCACTTGGTACTAAGGTTGAGAGGAGG 131886 Score = 118 bits (130), Expect = 9e-22 Identities = 167/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| || ||| | || || ||| | || ||| | ||||| ||| | | Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| | || ||||||||| || || |||||||| || || || || Sbjct 131596 GACACCATCGAA--AATGTAAAAGCAAAAATCCAA-GATAAAGAAGGAATCCCTCCAGAT 131540 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| | |||||||||| || ||||| | ||||||| || ||| || || ||| Sbjct 131539 CAGCAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTAC 131480 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||||||||| || || || ||||| || | || ||||||| |||| Sbjct 131479 AACATTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATTAAGAGGTGGAA 131428 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/222 (69%), Gaps = 1/222 (0%) Strand=Plus/Minus Query 25010 TGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGA 25069 |||||| |||| | ||||| | || || | |||||||| | |||||| || || Sbjct 125617 TGTAAAATATTTG-CAGGTAAGACGATAACTCTTGAAGTGGAACCAAGTGACACAATAGA 125559 Query 25070 GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTAT 25129 ||||| ||||||| || |||||||| ||||| || || || || || |||| Sbjct 125558 AAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAACGTCTTAT 125499 Query 25130 TTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGA 25189 |||||| ||||| || | ||||||| | || | ||||| || ||||| || || Sbjct 125498 TTTTGCTGGCAAGCAGCTTGAAGATGGCAGAACCCTTTCTGATTATAACATTCAGAAGGA 125439 Query 25190 ATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTA 25231 ||| || || ||| | || || || || | ||||||||||| Sbjct 125438 ATCTACTCTGCATCTTGTTCTGAGACTCCGTGGAGGAAATTA 125397 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 25026 GGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG---AAGCAA 25082 |||||| | || || | ||||| ||| | ||| ||||| || | || |||||| Sbjct 131327 GGTAAAACTATAACGTTGGAAGTCGAGCCCAGTGATACTATTGAA--AATGTTAAAGCAA 131270 Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 ||| || || |||||||| |||||||| || || ||| || | |||||||| || || Sbjct 131269 AAATACAA-GATAAAGAAGGTATTCCACCAGATCAGCAGAGGTTGATTTTTGCTGGTAAG 131211 Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202 || ||||||||| | || | || || ||||||||||| || || || ||||| Sbjct 131210 CAGCTAGAAGATGGCAGAACATTATCAGACTATAATATTCAAAAGGAGTCAACATTACAT 131151 Query 25203 TTAGTGCTAAGGCTAAGAGGAGG 25225 | || | ||||| ||||| || Sbjct 131150 CTTGTTTTGAGGCTGAGAGGTGG 131128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432965430806195