Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq12019 168 2e-36 >seq12019 Length=383594 Score = 168 bits (186), Expect = 2e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 || || || || ||||||| || ||||||||| ||||||||||| | || || || Sbjct 131667 AGCCTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGA 131726 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCT 288375 || |||||||||||||| || || ||||| |||||||| ||| | ||| || |||||| Sbjct 131727 CCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCT 131786 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 |||||||||||||| |||||||||||||| || | || || | ||||| || | ||| Sbjct 131787 TTATCCTGGATTTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTA 131846 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || || ||||| || || || || ||||| Sbjct 131847 ATGGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| |||||||| || | ||| || ||||| ||||| || || ||||| || || Sbjct 132605 TTCTTTTTGAATATTATAATCTGAGAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAA 132664 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || ||||| ||| | || ||||||||||| || || ||||| ||||| || || Sbjct 132665 GATAAGTCGCTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATT 132724 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | ||| || | |||||| || | ||||| || || || ||||||||||| || Sbjct 132725 TTCAATTGTATCACTGGGTTCTACCTCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCAC 132784 Query 288462 GAATATCTGCAT 288473 ||||||||||| Sbjct 132785 AAATATCTGCAT 132796 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || ||||| ||||| | | || ||||| || ||||| || || ||||| || Sbjct 131921 TTCTTTCTGAATATTGTAGTCCGATAAAGTACGTCCATCCTCTAACTGCTTCCCTGCAAA 131980 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || || | |||||| | || || |||||||||||||||||||| ||||| || || Sbjct 131981 TATAAGCCTTTGTTGATCAGGAGGAATACCTTCTTTATCCTGGATTTTAGCTTTAACATT 132040 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 |||||| | ||| || | || ||||| | ||||| || || || || ||||| || || Sbjct 132041 TTCTATTGTATCACTAGGCTCAACTTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAAC 132100 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 132101 AAAAATCTGCAT 132112 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 |||||||| || || ||||| | || || || || ||||| | ||||| || || || Sbjct 131466 TCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAA 131525 Query 288343 ATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| ||| ||||| ||||||||||||||| |||||||| ||||| || Sbjct 131526 ATAAGTCTCTGCTGA---TCTGGAGGGATTCCTTCTTTATCTTGGATTTTTGCTTTTACA 131582 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | || || | || ||||| | || ||||| || || || ||||| || Sbjct 131583 TTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTC 131642 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 131643 ACAAAAATCTGCAT 131656 Score = 111 bits (122), Expect = 4e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | || || || | ||||| ||| ||| || || || ||||| || | Sbjct 132798 CCACCACGTAACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGAC 132857 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||||||||| |||||||| || || || | |||||| | || Sbjct 132858 AAGGTTCGACCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGA 132917 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| || ||||| || ||||| || | ||| || | || || Sbjct 132918 ATTCCTTCCTTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACC 132977 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || | ||||| || || || || || || || || || ||||||||| || Sbjct 132978 TCCAAAGTGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTTG 133028 Score = 109 bits (120), Expect = 1e-18 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302 || ||| || |||||||| || || ||||| | || ||| || || || ||||| || Sbjct 125399 ATTTCCTCCACGGAGTCTCAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTATAATC 125458 Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 | || || | || ||||| | || || || || || || ||||| || ||| || Sbjct 125459 AGAAAGGGTTCTGCCATCTTCAAGCTGCTTGCCAGCAAAAATAAGACGTTGCTGA---TC 125515 Query 288363 TGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419 ||| |||||||||||||| |||||||| || ||||| |||||||| | || || | Sbjct 125516 TGGAGGAATTCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCTATTGTGTCACTTGG 125575 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCC 288446 ||| ||||| || || |||||||| || Sbjct 125576 TTCCACTTCAAGAGTTATCGTCTTACC 125602 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || || || || ||||| | || ||||||||||| ||||| || | Sbjct 132342 CCTCCTCGAAGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAGAT 132401 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| || || || || || || || || | || ||| ||| Sbjct 132402 AATGTACGTCCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGGA 132461 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| || |||||||| | ||| || | || ||| Sbjct 132462 ATGCCCTCCTTGTCTTGGATTTTTGCTTTGACATTTTCTATTGTATCACTGGGCTCAACT 132521 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || || || || || ||||| || || || |||||||| Sbjct 132522 TCTAATGTTATGGTTTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| ||||||||||| | | || | || ||||||| || || || || || Sbjct 131164 TCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTCTAGCTGCTTACCAGCAAAA 131223 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| ||| || ||||||||||| || ||||| ||||| || ||| Sbjct 131224 ATCAACCTCTGCTGATCTGGTGGAATACCTTCTTTATCTTGTATTTTTGCTTTAACATTT 131283 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCC 288446 || |||| ||| || | || ||||| | ||| || || || || Sbjct 131284 TCAATAGTATCACTGGGCTCGACTTCCAACGTTATAGTTTTACC 131327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178616756451734