Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq12019 141 9e-29 seq15467 111 2e-19 >seq12019 Length=383594 Score = 141 bits (156), Expect = 9e-29 Identities = 161/215 (75%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | ||| || || ||||| | || ||||| || |||||||| ||||| | Sbjct 125403 CCTCCACGGAGTCTCAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTATAATCAGAA 125462 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| | | ||||||||||||||||| ||| |||| || || ||||| || |||||| Sbjct 125463 AGGGTTCTGCCATCTTCAAGCTGCTTGCCAGCAAAAATAAGACGTTGCTGATCTGGAGGA 125522 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||||||||| ||||| |||||| ||| ||| || | ||| |||| | |||||| Sbjct 125523 ATTCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACT 125582 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | ||||| ||||| || | |||| |||||| Sbjct 125583 TCAAGAGTTATCGTCTTACCTG-CAAATATTTTAC 125616 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||| || ||||||| || || || | ||||| | |||||| || Sbjct 132600 GTAGATTCTTTTTGAATATTATAATCTGAGAGTGTACGTCCATCTTCCAACTGCTTTCCA 132659 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || |||||||| || ||||||||||||||||| ||||| ||||| ||| Sbjct 132660 GCAAAGATAAGTCGCTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATTTTAGCTTTT 132719 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | |||||||| || || || || | ||| | ||| || || |||| ||| Sbjct 132720 ACATTTTCAATTGTATCACTGGGTTCTACCTCCAAAGTGATGGTTTTTCCAGTCAGAGTC 132779 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 132780 TTCACAAATATCTGCAT 132796 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || || |||||||||| || |||||||||||||| || || |||| | || || | Sbjct 131670 CTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCA 131729 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| | || || || ||| | || || |||||||| || || ||||| |||||||| Sbjct 131730 TCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTA 131789 Query 64349 TCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || | |||||||||| || || | || |||| || || || |||| || | Sbjct 131790 TCCTGGA-TTTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTAAT 131848 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| || | ||||||||| ||||||||||| Sbjct 131849 GGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | || | ||||| || || ||||||||||||||||| || | | || || Sbjct 131439 AATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGG 131498 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||||||||| || || ||| |||| || | |||||| || ||||| ||||||||| Sbjct 131499 CCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCT 131558 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| |||||| |||||| || | || |||| | || ||||||| || Sbjct 131559 TTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTA 131618 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || || || || | |||||| || ||||| ||||| Sbjct 131619 ATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || || || |||| ||||| || ||||| || |||||||| ||||| | Sbjct 132797 ACCACCACGTAACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGA 132856 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | ||||| | ||||| || ||| | || |||| ||| ||||| ||||| Sbjct 132857 CAAGGTTCGACCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGG 132916 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || ||||| || || |||||| || | ||||||| | ||||| Sbjct 132917 AATTCCTTCCTTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCAC 132976 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | ||| | ||| || || || | ||||| || || || |||||||| Sbjct 132977 CTCCAAAGTGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || || || | || | ||||||||||| ||||| ||||| || | Sbjct 131885 ACCTCCTCTCAACCTTAGTACCAAGTGCAGAGTCGATTCTTTCTGAATATTGTAGTCCGA 131944 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || || | |||||| || ||| | || |||| || || || ||||| Sbjct 131945 TAAAGTACGTCCATCCTCTAACTGCTTCCCTGCAAATATAAGCCTTTGTTGATCAGGAGG 132004 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| |||||||| || || | |||| ||||| ||| || | |||||||| | || | Sbjct 132005 AATACCTTCTTTATCCTGGA-TTTTAGCTTTAACATTTTCTATTGTATCACTAGGCTCAA 132063 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| ||| | || || || || | |||||| || ||||| ||||| Sbjct 132064 CTTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATCTGCAT 132112 Score = 98.7 bits (108), Expect = 1e-15 Identities = 127/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || || || |||||||| || || |||| | || | | ||||| Sbjct 131146 ACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTCT 131205 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| || ||| |||| | || |||||| || || ||||| |||||||| |||||| Sbjct 131206 AGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATACCTTCTTTATCTTGT 131265 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTA 64406 | |||||||||| ||| || | ||||||| || || ||||| | |||| Sbjct 131266 A-TTTTTGCTTTAACATTTTCAATAGTATCACTGGGCTCGACTTCCAACGTTA 131317 >seq15467 Length=153806 Score = 111 bits (122), Expect = 2e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 154872 GGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCACC 154931 |||||||| || ||||||||||| | || ||| ||||||||||| ||||| || | | Sbjct 76919 GGACACATTAAACTCCACATTTCGTCCTTTTCTACTCGTTTCATAAATAAATCTGGAATC 76978 Query 154932 CACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAAA 154991 ||||| || || |||| ||| | ||| | | ||||| ||| | || ||||||| Sbjct 76979 CACAATGCATAAAACAGATCTCTGGCCCTCTGCTCTTCTTTGCCAGTATTCTTCTTTAAA 77038 Query 154992 TTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATA 155032 | ||||| ||| ||||||| || ||||| ||||||||||| Sbjct 77039 TCTAAAAAGTCAAATATGTCTGCATGCCAAGGCTCTAAATA 77079 Score = 82.4 bits (90), Expect = 8e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 154623 CTGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGA 154682 ||||| | |||||||| | ||| | ||||||||| | ||||| || | || || ||| Sbjct 76378 CTGTACTCAACAATTTCAGTGCATAGATTACTGCACTGTATGGTTCCTAAATTCTTTTGA 76437 Query 154683 TTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGG 154742 || ||||| || || || ||||| ||||| || || ||||| || ||||| | || Sbjct 76438 TTTGATTTTCGATTACAAGCATCTTTATACAACATATATGGGGTTCCTGTTTCAATCTGA 76497 Query 154743 GTTTCAATAATTG 154755 | ||||||||||| Sbjct 76498 GATTCAATAATTG 76510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499216023569320