Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq12019 131 2e-25 >seq12019 Length=383594 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || | |||||| ||||| | | ||||| ||||||||||||||||| | Sbjct 131430 CCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGAC 131489 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || ||||| || | | | || || | ||| || || ||||| Sbjct 131490 AGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGG 131549 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || |||||||| || ||||||| ||||| | ||| | |||||| | | ||| || Sbjct 131550 ATTCCTTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACT 131609 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||| || || |||||||| |||||||||||||| Sbjct 131610 TCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||| ||| | | | || || |||||||| || ||||| | |||||| || || Sbjct 131676 ACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCT 131735 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 | ||||||||| | | |||| |||||||| || || || || || |||||||| || | Sbjct 131736 AATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGG 131795 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 |||||| ||| | | ||| | |||||| | | ||| ||||| | ||| | || || Sbjct 131796 ATTTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTAATGGTCTTG 131855 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||||||||||||||||| ||||| Sbjct 131856 CCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 ||||||||||| || | | | || || |||||||| || || || | ||||| Sbjct 132582 CGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTACGTCCA 132641 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || | || || || | | |||| || ||||| || || ||||| || ||||||||| Sbjct 132642 TCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGAATTCCTTCTTTG 132701 Query 138520 TCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| |||| | ||||| | ||| | || || | | || ||||| | || | Sbjct 132702 TC-TTGAATTTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTACCTCCAAAGTGAT 132760 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||||||||||| || ||||| |||||||| Sbjct 132761 GGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCAT 132796 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || ||||| |||||||| | |||||| ||||| | || || || | | Sbjct 131919 GATTCTTTCTGAATATTGTAGTCCGATAAAGTACGTCCATCCTCTAACTGCTTCCCTGCA 131978 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || | ||||| || ||||| ||||||||||| || |||||| ||| | Sbjct 131979 AATATAAGCCTTTGTTGATCAGGAGGAATACCTTCTTTATCCTGGATTTTAGCTTTAACA 132038 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | || || | | ||| || || | || | ||||||||||| |||||||| Sbjct 132039 TTTTCTATTGTATCACTAGGCTCAACTTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTA 132098 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 132099 ACAAAAATCTGCAT 132112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495836526218160