Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq12019 127 5e-24 >seq12019 Length=383594 Score = 127 bits (140), Expect = 5e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | || ||||| ||||| ||||| | ||||||||||| || ||| | || Sbjct 131441 TCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCC 131500 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| ||||| || || || || || || | |||||| || ||| ||||||||| Sbjct 131501 ATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCTTT 131560 Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 || || || |||||| || || ||||| |||||| | | || || || || || | Sbjct 131561 ATCTTGGAT-TTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAA 131619 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| || || || ||||||||||||||||| || Sbjct 131620 TCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTG 131653 Score = 127 bits (140), Expect = 5e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 ||| || ||||| || || || || || || ||||| | || ||||| | | ||| | Sbjct 131666 AAGCCTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACG 131725 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||| | || || || || ||||| ||||||||||| || || ||| ||||| Sbjct 131726 ACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTC 131785 Query 199531 TCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | ||||| || |||||| |||||| ||| | |||||| | | ||||| || |||| Sbjct 131786 TTTATCCTGGAT-TTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACG 131844 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || ||||| || || |||||||| ||||||||||| Sbjct 131845 TAATGGTCTTGCCAGTAAGAGTTTTTACAAAAATTTG 131881 Score = 120 bits (132), Expect = 7e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||||||| ||||| || ||||| || ||||| || | ||| || |||| | || Sbjct 125409 CGGAGTCTCAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTATAATCAGAAAGGGTT 125468 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| |||||||| || || || || ||||| ||||| || ||| ||||||| Sbjct 125469 CTGCCATCTTCAAGCTGCTTGCCAGCAAAAATAAGACGTTGCTGATCTGGAGGAATTCCT 125528 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || || ||| |||||| ||| | ||||| ||| ||| || || | Sbjct 125529 TCTTTATCTTGGATTTTTGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACTTCAAGA 125588 Query 199589 GTGATCGTCTTACC 199602 || ||||||||||| Sbjct 125589 GTTATCGTCTTACC 125602 Score = 114 bits (126), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || ||||| || || | ||| || || || || ||||| | || || || | | || Sbjct 132575 TCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAGAGTGT 132634 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||||||||| ||||||||| || ||||| || |||||||| || ||| |||||| Sbjct 132635 ACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGAATTCC 132694 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 |||| || ||||| ||| || || || ||| | || || | | |||||| |||| Sbjct 132695 TTCTTTGTCTTGAAT-TTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTACCTCCA 132753 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | ||||| || || || || ||||| |||||||| || || Sbjct 132754 AAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTG 132793 Score = 104 bits (114), Expect = 6e-17 Identities = 156/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 || ||||| | || ||||| || ||||| || | ||| || |||| ||| || | ||| Sbjct 132810 CTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCA 132869 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 ||||| | |||||||| || || || || | ||| ||||| ||| ||||||||| Sbjct 132870 TCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTG 132929 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 || || ||||| || || ||| | ||| || ||| || || ||||| ||||| Sbjct 132930 TCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACCTCCAAAGTGATG 132989 Query 199595 GTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || || || ||||||||||| || || |||||| Sbjct 132990 GTTTTTCCAGTAAGTGTTTTCACAAAGATCTG---CATTTT 133027 Score = 87.8 bits (96), Expect = 4e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 |||||| || || ||||| || | || ||||| ||||||| ||| || |||| || || Sbjct 132347 TCGAAGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAGATAATGT 132406 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||||||||| |||||| || || || || || | ||||| || || ||| || Sbjct 132407 ACGTCCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGGAATGCC 132466 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 || || || || |||||| || || ||| | || || | | || || || | Sbjct 132467 CTCCTTGTCTTGGAT-TTTTGCTTTGACATTTTCTATTGTATCACTGGGCTCAACTTCTA 132525 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || || || |||||||| ||||| || || Sbjct 132526 ATGTTATGGTTTTTCCAGTAAGAGTTTTAACAAAGATCTG 132565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177884601034751