Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq12019 174 3e-38 seq12235 86.0 1e-11 >seq12019 Length=383594 Score = 174 bits (192), Expect = 3e-38 Identities = 166/210 (79%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||||| |||||| || ||||| || || || ||||| || ||||| | ||| ||||| Sbjct 125411 GAGTCTCAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTATAATCAGAAAGGGTTCT 125470 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| |||||||| || || || ||||| ||||| || ||||||||||| ||||| Sbjct 125471 GCCATCTTCAAGCTGCTTGCCAGCAAAAATAAGACGTTGCTGATCTGGAGGAATTCCTTC 125530 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAG 195098 ||| ||||| |||||| ||| || || || || ||||| ||| |||||||||||| Sbjct 125531 TTTATCTTGGATTTTTGCCTTCACATTTTCTATTGTGTC---ACTTGGTTCCACTTCAAG 125587 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128 || | |||||| |||| |||| |||||| Sbjct 125588 AGTTATCGTCTTACCTG-CAAATATTTTAC 125616 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | |||||||| |||||||||||||| ||||| || | ||||| Sbjct 131435 TCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGT 131494 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| ||||| || || || || ||||||| || || |||||||| || || Sbjct 131495 ACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCC 131554 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||| ||||| |||||| || || || || |||||||| | || ||||| | Sbjct 131555 TTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAA 131614 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||| |||||||| | |||||| || || | ||||| Sbjct 131615 TGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 141 bits (156), Expect = 2e-28 Identities = 167/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||| |||||| | ||| || || || |||||||||||||| ||||| | || || Sbjct 132575 TCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAGAGTGT 132634 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | |||||||| | |||||| || || ||||||||||| || || || |||||||| || Sbjct 132635 ACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGAATTCC 132694 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 |||||||||||||||||| || || || ||||| || || ||| ||| || || Sbjct 132695 TTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATTGTATC---ACTGGGTTCTACCTC 132751 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || | || ||||| |||| ||| || || || | ||||| Sbjct 132752 CAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCAT 132796 Score = 140 bits (154), Expect = 7e-28 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || || |||||||||||||| || || | |||||| | |||||||| Sbjct 131676 ACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCT 131735 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | || ||||| || |||||||| || || || || || |||||||||||||| || || Sbjct 131736 AATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGG 131795 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 |||||| || ||||| ||||||||||| ||| || || || | |||| ||| Sbjct 131796 ATTTTTGCTTTCACGTTTTCAATGGTGTC---ACTGGGCTCTACCTCTAACGTAATGGTC 131852 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | ||||||||| || | |||||| Sbjct 131853 TTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Score = 116 bits (128), Expect = 8e-21 Identities = 123/162 (76%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || ||||||||||| || | || ||||| ||||||||||| || || | | || Sbjct 131133 TCTCAGCCTCAAAACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCTGATAATGT 131192 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| ||||||||||| || || || | | || || ||||| ||||| || Sbjct 131193 TCTGCCATCTTCTAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATACC 131252 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 |||||| ||||| |||||| || || || ||||| || || Sbjct 131253 TTCTTTATCTTGTATTTTTGCTTTAACATTTTCAATAGTATC 131294 Score = 114 bits (126), Expect = 3e-20 Identities = 153/209 (73%), Gaps = 8/209 (4%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATC-GGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||| || || ||||| || ||||| | |||| |||| |||||||| | || Sbjct 132822 TGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAG-GTTCGACCATCTTCTAATTG 132880 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||| || || || | |||||||| |||||||| ||||| |||||||| || || Sbjct 132881 CTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGGATCTT 132940 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTCTTTCC 195113 || || || |||||||| || |||| ||||| || | || | || ||||| Sbjct 132941 AGCTTTTACATTTTCAATGGTATC---ACTTGGCTCCACCTCCAAAGTGATGGTTTTTCC 132997 Query 195114 TGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | ||||| || || | ||||||| Sbjct 132998 AGTAAGTGTTTTCACAAAGATCTGCATTT 133026 Score = 107 bits (118), Expect = 4e-18 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || || | |||||| || | || ||||||||||| || || ||||| | | || | Sbjct 132351 AGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAGATAATGTACGT 132410 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | ||||||||| || || ||||| | ||| || || || |||||||| || Sbjct 132411 CCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGGAATGCCCTCC 132470 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 |||||||| |||||| ||||| || || || || || ||| || ||||| | Sbjct 132471 TTGTCTTGGATTTTTGCTTTGACATTTTCTATTGTATC---ACTGGGCTCAACTTCTAAT 132527 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || ||||| || | |||||| || || | ||||| Sbjct 132528 GTTATGGTTTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| ||||| || ||||| ||||||||||| || | | ||| | ||||| || | ||| Sbjct 131909 GTGCAGAGTCGATTCTTTCTGAATATTGTAGTCCGATAAAGTACGTCCATCCTCTAACTG 131968 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||| || ||||| | |||||| || |||||||| |||||||| || || ||||| Sbjct 131969 CTTCCCTGCAAATATAAGCCTTTGTTGATCAGGAGGAATACCTTCTTTATCCTGGATTTT 132028 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || || || || || || | || ||||| | || | || || || || Sbjct 132029 AGCTTTAACATTTTCTATTGTATCACTAGGCTCAACTTCTAAAGTGATAGTTTTACCAGT 132088 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | |||||| || || | ||||| Sbjct 132089 AAGAGTTTTAACAAAAATCTGCAT 132112 >seq12235 Length=595988 Score = 86.0 bits (94), Expect = 1e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| | |||||| || ||||| || |||||||||||||| | | || | ||||| Sbjct 179216 CAGAACTAAGTGAAGTGTAGACTCCTTCTGAATATTGTAATCTGATAATGTACGACCATC 179275 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 ||| | |||||| || || || |||||||| || || || |||||||| ||| Sbjct 179276 TTCCAACTGCTTTCCAGCAAAAATAAGTCGCTGCTGATCAGGAGGAATACCT 179327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108505681608851