Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq12019 122 6e-23 >seq12019 Length=383594 Score = 122 bits (134), Expect = 6e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| || |||||||| || || | | ||| |||| |||| ||| || || |||||| Sbjct 132378 TCTTTTTGGATGTTATAATCAGATAATGTACGTCCATCTTCCAACTGCTTACCAGCAAAT 132437 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||| || | || | ||||||||||| || || |||||| | Sbjct 132438 ATAAGCCTTTGCTGATCGGGTGGAATGCCCTCCTTGTCTTGGATTTTTGCTTTGACATTT 132497 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 |||| | |||| || |||||| || | |||||||||||||| || ||||| || ||| Sbjct 132498 TCTATTGTATCACTGGGCTCAACTTCTAATGTTATGGTTTTTCCAGTAAGAGTTTTAACA 132557 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 132558 AAGATCTGCATA 132569 Score = 118 bits (130), Expect = 7e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| || | | |||||| ||||| | || |||||| ||||| ||||| || || Sbjct 132570 CCTCCTCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAG 132629 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | ||| |||| |||| ||| ||||| ||||| || ||||| ||||| || | || Sbjct 132630 AGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGA 132689 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || ||||| ||| || ||| || | | || | |||| || || || Sbjct 132690 ATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTACC 132749 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||||||||| || |||||||||||||| ||||||||| Sbjct 132750 TCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCATA 132797 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| || || || ||||||||||| |||| || ||||| |||||||| ||||| | Sbjct 131428 TTCCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAG 131487 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | || | || |||| || |||||||| || ||||| || |||| ||||| ||| | | Sbjct 131488 ACAGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAG 131547 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | || || || || || || ||| || | | || | |||| | ||||| Sbjct 131548 GGATTCCTTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAA 131607 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || || |||||||| || ||||| |||||||| ||||||||| Sbjct 131608 CTTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCATA 131657 Score = 111 bits (122), Expect = 1e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 34764 AACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGT 34823 ||||| | || || |||| ||| ||| |||||||||||||| || || | | |||| Sbjct 132807 AACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGA 132866 Query 34824 TCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34883 |||| || | || ||||| ||||||||||| | || ||||| | || | || ||| Sbjct 132867 CCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCC 132926 Query 34884 TTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTT 34943 ||||| ||||| ||| || | | || | |||| | ||| || || | || Sbjct 132927 TTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACCTCCAAAGTG 132986 Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||||||||||| || || || ||||||||||||||||| || Sbjct 132987 ATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| |||||||| | |||||||| | || |||||||||||| || |||||||| Sbjct 131886 CCTCCTCTCAACCTTAGTACCAAGTGCAGAGTCGATTCTTTCTGAATATTGTAGTCCGAT 131945 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | ||| |||| || | ||| || || |||||||| || | ||| || || | || Sbjct 131946 AAAGTACGTCCATCCTCTAACTGCTTCCCTGCAAATATAAGCCTTTGTTGATCAGGAGGA 132005 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | || || || || || || ||| || | |||| | |||| | |||||| Sbjct 132006 ATACCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCTATTGTATCACTAGGCTCAACT 132065 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || || ||||| || || ||||| || ||||| |||||||| Sbjct 132066 TCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATCTGCAT 132112 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||||||||| || | | || |||| |||| ||| || || ||||| Sbjct 132149 TTCTTTCTGAATGTTATAGTCTGATAATGTACGCCCATCTTCCAACTGCTTACCAGCAAA 132208 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||| || | || || || | || | || ||||| || || || ||| || Sbjct 132209 TATGAGCCTCTGTTGATCAGGTGGGATGCCTTCCTTATCTTGGATTTTAGCTTTCACATT 132268 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | |||| || ||||| || | || ||||| ||||| || ||||| || || Sbjct 132269 TTCAATTGTGTCACTGGGTTCAACTTCCAATGTAATGGTCTTTCCAGTAAGAGTTTTAAC 132328 Query 34970 AAAGATCTGCATA 34982 ||||||||||||| Sbjct 132329 AAAGATCTGCATA 132341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324361976327784