Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3821 114 2e-20 >seq3821 Length=102291 Score = 114 bits (126), Expect = 2e-20 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 37190 ATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACC 37249 ||| | |||| |||||| ||||||||||||||| ||| || | || ||||||||||| Sbjct 78305 ATGCATACCT-CATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGGCATTAAACC 78363 Query 37250 TCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGC 37309 ||| || || | ||| ||||| | |||||| || ||||||||||| || ||||| || || Sbjct 78364 TCTCTTCTTCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCCTTCTACAGC 78423 Query 37310 TGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGT 37369 |||||||| || | ||| ||| || | || | || | |||||| || | Sbjct 78424 AGCAAATGCAACGATTCGTTCACCAAAGGATGCATGCGTATGATTAATCCAATTCAAAGC 78483 Query 37370 CCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 |||||| || || || ||||| || |||||||| || || || Sbjct 78484 CCAATCAGCTTTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAA 78531 Score = 102 bits (112), Expect = 1e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 37563 AAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAA 37622 || |||||||| || || |||||||| |||||||| || || | || | | ||||| Sbjct 84876 AAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATAAAG 84935 Query 37623 TGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCA 37682 || |||| || ||| |||| |||||| | |||||||||||| |||||||| Sbjct 84936 TGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACTTCT 84995 Query 37683 TCAACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGT 37742 ||| | ||||| || || || |||||||||| ||| ||||| | || | Sbjct 84996 TCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATACTCA 85055 Query 37743 ATTGGAAATATTACAAATCTA 37763 || |||||||||||||||||| Sbjct 85056 ATGGGAAATATTACAAATCTA 85076 Score = 96.9 bits (106), Expect = 4e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 37438 TATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAG 37497 ||||| | || ||||||||||| || ||||| |||||||| || || | ||||||||| | Sbjct 82884 TATCTTTAATGTAAGTATCAATAAGCAAACTGTACATTTCTGAATGGACATTTTCAATTG 82943 Query 37498 CTATCTGAAAACCATAAAAACACCTAGCTTCAG 37530 ||||||| |||||||| ||||| | ||||||| Sbjct 82944 CTATCTGGAAACCATAGAAACAGCGGGCTTCAG 82976 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 36827 TTAAAAATCTTCATCTAACGTAAATTTTATTTCCTTATTACTATTCATAACTCCCATTTT 36886 |||||||||| ||||||| || || |||| || || ||| ||||| || Sbjct 76391 TTAAAAATCTGCATCTAATGTGAAACGGTGATCCTCCTTTTTAGACATGACTCCACACTT 76450 Query 36887 TTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTC 36946 |||||||||||| ||| | | || ||||| ||||| || ||||||| |||| || Sbjct 76451 TTGATATTCTCCGACTTTTTTCTCAAAAAAGTTTGTTTTCCCTTCTAAGCTAATATGCTC 76510 Query 36947 CATAAAATCAAATGGATT 36964 |||||||||||||||||| Sbjct 76511 CATAAAATCAAATGGATT 76528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591808495934120