Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq12019 104 2e-17 >seq12019 Length=383594 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || || ||||| ||||| ||| || ||| Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | || ||||||| || ||||| ||| | || |||||| Sbjct 131596 GACACCATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATCAG 131537 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||||||||| ||||| || ||||| | |||||| ||| || | || || ||| Sbjct 131536 CAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAAC 131477 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||| |||||||| || |||| || |||||| |||| || || Sbjct 131476 ATTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATTAAGAGGTGGAAT 131427 Score = 93.3 bits (102), Expect = 4e-14 Identities = 115/154 (75%), Gaps = 5/154 (3%) Strand=Plus/Minus Query 28632 AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCG 28691 |||| |||| || |||||||| ||| | || ||||| ||| ||||||||||||| Sbjct 132717 AAGCTAAAATTCAA-GACAAAGAAGGAATTCCTCCTGATCAGCAGCGACTTATCTTTGCT 132659 Query 28692 GGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTA 28749 || || || ||||||||| | | ||| | | |||||||| |||||||||||||||| Sbjct 132658 GGAAAGCAGTTGGAAGATGGACGTACACTCT--CAGATTATAATATTCAAAAAGAATCTA 132601 Query 28750 CTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | |||||| | || || || | ||||||| || Sbjct 132600 CCCTGCACTTAGTTTTGCGACTTAGAGGAGGTAT 132567 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/118 (77%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCG 28725 ||||||||||| || || ||||| || || || ||||||||| | | | ||| | | Sbjct 132226 GATCAACAGAGGCTCATATTTGCTGGTAAGCAGTTGGAAGATGGGCGTACATTAT--CAG 132169 Query 28726 ATTATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | ||||||||||| ||||||||||||||||| | || || || | ||||||||||| Sbjct 132168 ACTATAACATTCAGAAAGAATCTACTCTGCATCTAGTGTTGAGGCTTCGAGGAGGGAT 132111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425048860214487