Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq12019 158 2e-33 seq3821 122 2e-22 seq18955 114 2e-20 seq1189 87.8 3e-12 seq12235 84.2 4e-11 >seq12019 Length=383594 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||||||||| || ||||| || | |||| ||||| ||||||||||||| Sbjct 132567 ATACCTCCTCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCT 132626 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || ||||| || || |||||||| || | || ||| || ||||| Sbjct 132627 GAGAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGA 132686 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||| ||||| |||||| ||||||||| || ||||| | |||| Sbjct 132687 GGAATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCT 132746 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| |||||||| ||||| | || || | ||||||||||| Sbjct 132747 ACCTCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCAT 132796 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || || |||| ||| | || |||| ||| | ||||| ||||| ||| ||||| ||| Sbjct 132111 ATCCCTCCTCGAAGCCTCAACACTAGATGCAGAGTAGATTCTTTCTGAATGTTATAGTCT 132170 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || ||||| || ||||||||||| || | |||||||| |||||| Sbjct 132171 GATAATGTACGCCCATCTTCCAACTGCTTACCAGCAAATATGAGCCTCTGTTGATCAGGT 132230 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| |||||| ||| ||||| || || || | ||| Sbjct 132231 GGGATGCCTTCCTTATCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCACTGGGTTCA 132290 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | |||||||| || ||||| | ||||||| || |||||||| Sbjct 132291 ACTTCCAATGTAATGGTCTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132340 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| ||||| | | || ||| || || | ||| | ||||| |||||| || || Sbjct 131883 ATACCTCCTCTCAACCTTAGTACCAAGTGCAGAGTCGATTCTTTCTGAATATTGTAGTCC 131942 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| ||| | || || || || || || ||||| || | || ||||| ||||| Sbjct 131943 GATAAAGTACGTCCATCCTCTAACTGCTTCCCTGCAAATATAAGCCTTTGTTGATCAGGA 132002 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || |||||| ||| ||||| ||| ||||| | || Sbjct 132003 GGAATACCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCTATTGTATCACTAGGCTCA 132062 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||| || ||||||||||| | ||||||| || |||||||| Sbjct 132063 ACTTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATCTGCAT 132112 Score = 131 bits (144), Expect = 3e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 |||||||| | ||| | || || ||| |||||||| || || | ||| | || || Sbjct 132816 ACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCATCTTCT 132875 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 ||||| || || ||||| |||| |||||||||||||| || |||||||| || ||||| Sbjct 132876 AATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGG 132935 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 || ||| ||||||||| || ||||| | || || || | ||| |||||||| Sbjct 132936 ATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACCTCCAAAGTGATGGTTTTT 132995 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| | |||||| | || ||||||||||| Sbjct 132996 CCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || | || || | |||||| || | ||| || ||||||||| ||| Sbjct 131125 ATGCCACCTCTCAGCCTCAAAACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCT 131184 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || || | || |||||||||||||| || ||||| || || ||| Sbjct 131185 GATAATGTTCTGCCATCTTCTAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGT 131244 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||||||||||||||| ||| ||||| |||||||| | || Sbjct 131245 GGAATACCTTCTTTATCTTGTATTTTTGCTTTAACATTTTCAATAGTATCACTGGGCTCG 131304 Query 172020 ACTTCTAGAGTAATGGTTTTACC 172042 ||||| | || || |||||||| Sbjct 131305 ACTTCCAACGTTATAGTTTTACC 131327 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || || || ||||| | ||||| |||||| ||| || || || Sbjct 131427 ATTCCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCA 131486 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || | ||||| ||||||||||| | |||||| || || || Sbjct 131487 GACAGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGA 131546 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||||||||||||||| ||||| ||||||||| || || || | || Sbjct 131547 GGGATTCCTTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCA 131606 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||||| ||||| || || | ||||| | || |||||||| Sbjct 131607 ACTTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| |||| ||| | || || | ||| || || | |||||| || |||||||| Sbjct 132339 ATACCTCCTCGAAGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCA 132398 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | ||| | || ||||| || ||||||||||| || | || || || || ||| Sbjct 132399 GATAATGTACGTCCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGT 132458 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || ||||| ||||| ||| ||||| ||| ||||| | || Sbjct 132459 GGAATGCCCTCCTTGTCTTGGATTTTTGCTTTGACATTTTCTATTGTATCACTGGGCTCA 132518 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| || |||||||| ||||| | ||||||| || |||||||| Sbjct 132519 ACTTCTAATGTTATGGTTTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || ||||| | || |||| ||| | |||| ||||| ||||||||| ||| Sbjct 131655 ATACCTCCCCTAAGCCTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCT 131714 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || || ||||||||||||||||| || | | ||| || |||||| Sbjct 131715 GAAAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGT 131774 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||||||||| || ||||| ||| || || || || || | ||| Sbjct 131775 GGAATGCCTTCTTTATCCTGGATTTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCT 131834 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || |||| |||||||| || ||||| | ||||| | || || ||||| Sbjct 131835 ACCTCTAACGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 >seq3821 Length=102291 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 39510 ACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAGAATGCTAAAACATATTTAATA 39569 || ||||| ||| ||||| |||||| ||||| || |||||||||| | | |||| Sbjct 84873 ACCAAATTTTCATTCACAATGCCATCACTCGCTGCAAAAAATGCTAAAATGTGTGAAATA 84932 Query 39570 AAATGTTTTTCATTATCTTTTAAATTTTCCCAAGATTCAAGATCGTTTGATAAATCTACT 39629 || || ||||| | ||||| ||||||||| | | ||||| |||||||| || ||| Sbjct 84933 AAGTGCTTTTCTTCGGGCTTTAACTTTTCCCAATCTCCTAGATCTTTTGATAAGTCAACT 84992 Query 39630 TCTTCTATTGTCCAAAAAGATGCTACGGATTTTTTATACATTTGATATATATCAAAATGT 39689 ||||| ||||| || || ||| | | ||||||||||| || ||||||| || Sbjct 84993 TCTTCAGCAGTCCAGAACGAAGCTTCAGCCTTTTTATACATCTGCCATATATCTTGATAC 85052 Query 39690 TCAATGGGAAATAACACATATC 39711 ||||||||||||| ||| ||| Sbjct 85053 TCAATGGGAAATATTACAAATC 85074 Score = 120 bits (132), Expect = 5e-22 Identities = 175/243 (72%), Gaps = 7/243 (3%) Strand=Plus/Plus Query 39131 AAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGG 39190 |||| | | ||| | |||| | || | | ||| |||||||| ||||| || | || || Sbjct 78296 AAAAACTGGATGCATACCT-CATCTCGACTTATCAATTCATTGCTAAATGTAAGGCCAGG 78354 Query 39191 CATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACC 39250 |||||| |||||||| || ||||| ||||| |||||||| || |||||||||||| || Sbjct 78355 CATTAAACCTCTCTTCTTCAGCCAGAATATGGATGCAAATGAACCAGAAAAGAATATTCC 78414 Query 39251 CTCCACACACGCAAATGCTATTATTCTTGCTCCAAA-CATTAAT--TTATCATCTAAAAT 39307 || ||| |||||||| | |||| | | ||||| || || ||| || ||| Sbjct 78415 TTCTACAGCAGCAAATGCAACGATTCGTTCACCAAAGGATGCATGCGTATGAT---TAAT 78471 Query 39308 CCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 39367 |||||| | |||||||| ||||| || || | | | | | | |||| ||||| || || Sbjct 78472 CCAATTCAAAGCCCAATCAGCTTTCTTCTTCACACAGGAAAGAGTTTCAATAGCATTGAA 78531 Query 39368 TAA 39370 ||| Sbjct 78532 TAA 78534 >seq18955 Length=240697 Score = 114 bits (126), Expect = 2e-20 Identities = 166/224 (74%), Gaps = 13/224 (6%) Strand=Plus/Minus Query 49474 TTTAGAATTATTTAACATCATTATAGCTTCTTTAAAATTATCAACAGGCATTAATATCCA 49533 |||||| |||||||||||||||||| |||||||||| | | | || |||||| ||| Sbjct 183405 TTTAGA--TATTTAACATCATTATAGATTCTTTAAAA-CAACTATAGACATTAAACACCA 183349 Query 49534 TCTTTTTAAATGTATAGTATGCGGATTAGATTCttt-tatatcattttgtatatattcat 49592 | | | |||||| || || || | || ||| ||| |||| | |||||||| | Sbjct 183348 TTTCTCTAAATGAATTGTTCTTTCATCACTTTTTTTCTATTTCATCTAATATATATT--T 183291 Query 49593 ataatttt--attttatcatttttataatctatgtgttcgtattctatgttattttcttt 49650 |||||||| | || ||||| ||||||||||| | ||| |||| ||| |||||||||| Sbjct 183290 ATAATTTTTAACCTTTTCATTCTTATAATCTATATTTTCATATTTTATATTATTTTCTTC 183231 Query 49651 taGAAATTCTATAAATCTTCtttttttATCTCTTAATGACACAT 49694 || ||| | ||||| ||| ||||||||| | || |||||| Sbjct 183230 TA-AAACTAGATAAA-ATTC-GTTTTTATCTATAAA--ACACAT 183192 >seq1189 Length=753237 Score = 87.8 bits (96), Expect = 3e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 ||||| || || |||| ||||| |||||| |||||||| |||| | | | || ||| Sbjct 67468 ACTAAGTGCAATGTAGATTCTTTCTGAATATTGTAATCTGACAAAGTCCTTCCATCTTCC 67409 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCT 171968 || ||||||||||||||||| |||| ||| || ||||| || || ||| Sbjct 67408 AACTGTTTACCAGCAAAAATCAATCGCTGCTGATCAGGAGGGATACCT 67361 >seq12235 Length=595988 Score = 84.2 bits (92), Expect = 4e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 ||| ||||| || ||||| |||||| || ||||| || ||||| |||| ||| || Sbjct 180033 TATACCTTCCTTGTCTTGAATTTTAGCCTTCACATTTTCAATTGTATCCGACGCTTCAAC 180092 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||| || || ||||| || |||||||||||||| | || |||||||| || Sbjct 180093 TTCGAGCGTGATGGTCTTCCCAGTTAATGTTTTCACAAAAATCTGCATCTT 180143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904359246227400