Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq21116 131 5e-25 seq5585 116 1e-20 seq3821 102 2e-16 seq15467 91.5 4e-13 seq16493 87.8 5e-12 >seq21116 Length=531285 Score = 131 bits (144), Expect = 5e-25 Identities = 191/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633 ||||||| || || | || ||||| |||||||||||| || |||||||||||| || Sbjct 34923 TTCCATAGCTTTTATGAGTCGTCGCTGGATATAACCAGTTTCAGCTGTTTTTACAGCAGT 34982 Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCC 302693 |||||| ||||| |||||||||||||||||||||| || | ||| ||| || || Sbjct 34983 ATCAATAAGACCTTCACGACCACCCATAGCATGGAAAAAAAATTCTGATGGTGTTAAACC 35042 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753 ||| | | || | ||||| || || | ||| ||| || || || |||| Sbjct 35043 TGCAAGATATGAATTTTCAACAAATCCTCTACTCTCAGGCCCATAATCATCTTTTATAAA 35102 Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813 ||||||| || | ||| | | || |||| || || ||||| ||||| |||||||| Sbjct 35103 ATGTGGCAATGTACGCTTCCTAAAACCAAATGGTATTCGTTTTCCTTCAACATTCTGCTG 35162 Query 302814 TCCCAGGCACGAAATCATCTGCGAAATATT 302843 |||| || | ||| | || |||||||| Sbjct 35163 ACCCACACATGCAATAACTTGAGAAATATT 35192 >seq5585 Length=402559 Score = 116 bits (128), Expect = 1e-20 Identities = 246/362 (68%), Gaps = 9/362 (2%) Strand=Plus/Plus Query 289012 GAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAA 289071 |||| || ||||| ||| || | ||||||||| ||||| || || ||||| || | Sbjct 224111 GAATTACTTCTTTTAGCACCTACGGAATCAATTTCATCAATAAATATAACACAAGGTGCT 224170 Query 289072 TTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATT 289131 || | | || | ||||| |||| || | ||| || | ||||| ||| Sbjct 224171 CTTGATTTTGCTCTACTGAATAAGTCTCGAACTCTTCGTGCACCCTGGCCAACTAGAATT 224230 Query 289132 TCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCC 289191 || ||||||| | | | | |||| |||| ||||| |||||| ||||| || || Sbjct 224231 TCATCAAATTCTGGTCCAGCAGCATGAAAAAATGGTACATCTGCTTCTCCTGCAACAGCT 224290 Query 289192 CTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACT 289251 || || || |||||||| ||||| || || || ||| | || || || || ||||||| | Sbjct 224291 CTTGCAAGCAGTGTCTTTCCTGTACCTGGAGGACCCACCAAAAGTACACCTTTTGGTAAT 224350 Query 289252 TTTGCCCCA---GCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCA 289308 || | || ||||| | | || ||||| | | ||||||||||| ||||| | Sbjct 224351 TTCCCACCTAAGGCAGA---AAACTTTTCAGGATTTCTCAAAAATTCTACTATTTCTTGC 224407 Query 289309 AGTTCATATTTTGCCTCATC-ACATCCTGCTACATCAGCAAAAGTAATATTAATATCGTT 289367 | ||| | ||||| ||||| ||| ||| |||||| ||||||| | || ||| || || Sbjct 224408 AATTCTTGCTTTGCTTCATCAACACCCT-TTACATCTTCAAAAGTTACATCAATCTC-TT 224465 Query 289368 CT 289369 || Sbjct 224466 CT 224467 >seq3821 Length=102291 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 133072 TAGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCA 133131 ||| ||||| || || || ||| || | | || || ||||||||||||||||| | Sbjct 85076 TAGATTTGTAATATTTCCCATTGAGTATCAAGATATATGGCAGATGTATAAAAAGGCTGA 85017 Query 133132 AGATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGC 133191 || || || |||||| | ||||| || ||||| ||||| | || | |||||| Sbjct 85016 AGCTTCGTTCTGGACTGCTGAAGAAGTTGACTTATCAAAAGATCTAGGAGATTGGGAAAA 84957 Query 133192 CCTTACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGA 133251 | | || ||||| || |||||||| |||||||| |||||||| |||||||| Sbjct 84956 GTTAAAGCCCGAAGAAAAGCACTTTATTTCACACATTTTAGCATTTTTTGCAGCGAGTGA 84897 Query 133252 TGGTATTGTTCTTGAAAATTT 133272 ||| ||||| ||||||||| Sbjct 84896 TGGCATTGTGAATGAAAATTT 84876 >seq15467 Length=153806 Score = 91.5 bits (100), Expect = 4e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 155627 GCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTG 155686 |||||| || ||||| ||| ||| || ||| | || ||||| ||||||||||| || Sbjct 76377 GCTGTACTCAACAATTTCAGTGCATAGATTACTGCACTGTATGGTTCCTAAATTCTTTTG 76436 Query 155687 GTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 || ||||| | ||||||||||| || || | || |||||||||||||| || ||||| Sbjct 76437 ATTTGATTTTCGATTACAAGCATCTTTATACAACATATATGGGGTTCCTGTTTCAATCTG 76496 >seq16493 Length=1120872 Score = 87.8 bits (96), Expect = 5e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 289114 CCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTT 289173 |||| ||||||| ||||||||| |||||| ||| | || || ||| |||| |||||| Sbjct 849985 CCAACACCAACAAACATTTCTAAAAATTCTGAACCAGAAACAGTAATAAATGGCACATTT 849926 Query 289174 GCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCC 289226 ||||| ||||| || | || | ||||||||| || ||||||||||| || Sbjct 849925 GCTTCTCCTGCCGTAGCTTTAGCTAAAAGTGTCTTTCCAGTTCCAGGTGGACC 849873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1470522964862061