Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq12019 147 2e-30 seq15467 95.1 1e-14 >seq12019 Length=383594 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || || ||||| || || | || |||||| ||| Sbjct 132796 ATGCAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGT 132737 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| |||||| || || ||||||||||||||||| ||||| ||||| Sbjct 132736 GATACAATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 132677 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || || | |||||||| || || ||| |||| ||| || ||| | ||||||||||| Sbjct 132676 CAGCGACTTATCTTTGCTGGAAAGCAGTTGGAAGATG-GACGTACACTCTCAGATTATAA 132618 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| || || ||||| || |||||| | | ||||| Sbjct 132617 TATTCAAAAAGAATCTACCCTGCACTTAGTTTTGCGACTTAGAGGAGG 132570 Score = 136 bits (150), Expect = 4e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 ||||| || || || || ||||| ||| | | |||||| |||||| || || ||| Sbjct 125602 GGTAAGACGATAACTCTTGAAGTGGAACCAAGTGACACAATAGAAAATGTGAAGGCAAAA 125543 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 |||||||| ||||||||||| ||||| ||||| |||||| | || ||||| || || ||| Sbjct 125542 ATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAACGTCTTATTTTTGCTGGCAAGCAG 125483 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTG 24910 || || ||| |||| | | || |||||||||||||| |||||||| || || || | Sbjct 125482 CTTGAAGATGGCAGAACCCTTTCTGATTATAACATTCAGAAGGAATCTACTCTGCATCTT 125423 Query 24911 GTGTTGCGATTGCGCGGAGG 24930 || || || | || ||||| Sbjct 125422 GTTCTGAGACTCCGTGGAGG 125403 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || ||||| ||||| | ||||| || | | Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| ||| |||||||| ||||||||||| ||||| ||||| Sbjct 131596 GACACCATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATCAG 131537 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| ||||||||||| || ||| | | |||| || || ||| Sbjct 131536 CAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAAC 131477 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921 |||||||| || || || || || ||||| ||| |||| Sbjct 131476 ATTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATT 131439 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| ||||||| || || ||||||||||| || | ||||| || | | Sbjct 132113 GATGCAGATTTTTGTTAAAACTCTTACTGGTAAAACTATCACTTTAGAAGTTGAGCCTAG 132054 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| || ||| || ||||| || |||||||| || ||||| ||||| Sbjct 132053 TGATACAATAGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGTATTCCTCCTGATCA 131994 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | | || ||||| ||||| ||| | |||||| | | | || || || || Sbjct 131993 ACAAAGGCTTATATTTGCAGGGAAGCAGTTAGAGGATGGACGTACTTTATCGGACTACAA 131934 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || |||||||| || |||||||| | | ||| | ||||| Sbjct 131933 TATTCAGAAAGAATCGACTCTGCACTTGGTACTAAGGTTGAGAGGAGG 131886 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| ||||||| || || || || || ||||| | ||||| ||| ||| Sbjct 132340 ATGCAGATCTTTGTTAAAACTCTTACTGGAAAGACCATTACATTGGAAGTTGAACCCAGT 132281 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| || |||||||| || ||||| || || || |||||| Sbjct 132280 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGATAAGGAAGGCATCCCACCTGATCAA 132221 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || || ||| |||| ||| | | | | ||||| |||||| Sbjct 132220 CAGAGGCTCATATTTGCTGGTAAGCAGTTGGAAGATGGGCGTACATTATCAGACTATAAC 132161 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || || | |||||| | | || ||||| Sbjct 132160 ATTCAGAAAGAATCTACTCTGCATCTAGTGTTGAGGCTTCGAGGAGG 132114 Score = 123 bits (136), Expect = 2e-23 Identities = 155/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| ||||||| || || || ||||| || || | ||||| || ||| Sbjct 132568 ATGCAGATCTTTGTTAAAACTCTTACTGGAAAAACCATAACATTAGAAGTTGAGCCCAGT 132509 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| || ||| ||| ||||||||||| || || || || |||||||| Sbjct 132508 GATACAATAGAAAATGTCAAAGCAAAAATCCAAGACAAGGAGGGCATTCCACCCGATCAG 132449 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATG-TCAGATTATAA 24882 ||| | | || ||||| || || ||| |||| ||| || |||| || |||||||| Sbjct 132448 CAAAGGCTTATATTTGCTGGTAAGCAGTTGGAAGATG-GACGTACATTATCTGATTATAA 132390 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||| ||||| || || ||| | || |||| Sbjct 132389 CATCCAAAAAGAGTCAACATTGCATCTTG 132361 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || ||||| || || | || || || | | Sbjct 133024 ATGCAGATCTTTGTGAAAACACTTACTGGAAAAACCATCACTTTGGAGGTGGAGCCAAGT 132965 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| |||||| |||||||||||||| |||||||| ||||| || ||| Sbjct 132964 GATACCATTGAAAATGTAAAAGCTAAGATCCAAGACAAGGAAGGAATTCCTCCTGACCAA 132905 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || || || | || ||| ||| | |||| ||||||||| Sbjct 132904 CAGAGGCTAATATTTGCAGGAAAGCAATTAGAAGATGGTCGAACCTTGTCTGATTATAAC 132845 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| |||||||| || || || || || Sbjct 132844 ATTCAGAAGGAATCCACTCTTCATTTAGT 132816 Score = 111 bits (122), Expect = 1e-19 Identities = 134/181 (74%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 24731 GGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAG 24790 ||||||||||| ||| | ||||| || ||| || || | |||| || ||| ||| Sbjct 131327 GGTAAAACTATAACGTTGGAAGTCGAGCCCAGTGATACTATTGAAAATGTTAAAGCAAAA 131268 Query 24791 ATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAG 24850 || ||||| |||||||| || || || ||||| || | ||||| ||||| || || ||| Sbjct 131267 ATACAAGATAAAGAAGGTATTCCACCAGATCAGCAGAGGTTGATTTTTGCTGGTAAGCAG 131208 Query 24851 CTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA-CTT 24909 || || ||| |||| | ||||| ||||| ||||||||||| || ||| |||| ||| Sbjct 131207 CTAGAAGATGGCAGAACATTATCAGACTATAATATTCAAAAGGAGTCAACATTACATCTT 131148 Query 24910 G 24910 | Sbjct 131147 G 131147 >seq15467 Length=153806 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 139119 GCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTG 139178 |||||| || |||||||| | || | |||||| |||| || || |||||||| | ||| Sbjct 76377 GCTGTACTCAACAATTTCAGTGCATAGATTACTGCACTGTATGGTTCCTAAATTCTTTTG 76436 Query 139179 ATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTG 139238 ||| |||||| |||||||||||||| || | |||||| || || || ||||| | || Sbjct 76437 ATTTGATTTTCGATTACAAGCATCTTTATACAACATATATGGGGTTCCTGTTTCAATCTG 76496 Query 139239 TGTCTCTATAAT 139250 | || ||||| Sbjct 76497 AGATTCAATAAT 76508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449511514750840