Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq12019 111 1e-19 >seq12019 Length=383594 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| |||||| | || || ||||| ||||| | ||| |||||| Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | |||||| || || || |||||||| | || ||||| Sbjct 131596 GACACCATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATCAG 131537 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || |||||||||| ||| || |||||||| || |||| | | || || | || |||||| Sbjct 131536 CAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAAC 131477 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||||||||| ||||| | || |||| || ||| | |||| |||| Sbjct 131476 ATTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATTAAGAGGTGGAA 131428 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| |||||| | || || ||||| || || | ||| |||||| Sbjct 132112 ATGCAGATTTTTGTTAAAACTCTTACTGGTAAAACTATCACTTTAGAAGTTGAGCCTAGT 132053 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| || || || |||||||| | || |||||| Sbjct 132052 GATACAATAGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGTATTCCTCCTGATCAA 131993 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||||| ||||| | ||| || || ||| | ||||||| | || | |||| ||||| Sbjct 131992 CAAAGGCTTATATTTGCAGGGAAGCAGTTAGAGGATGGACGTACTTTATCGGACTACAAT 131933 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| |||||||| || ||||| |||| |||| || |||| || Sbjct 131932 ATTCAGAAAGAATCGACTCTGCACTTGGTACTAAGGTTGAGAGGAGG 131886 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| || ||| | || || |||||||| || | || || || Sbjct 132796 ATGCAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGT 132737 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | |||||| || ||| ||||||||||| | || ||||| Sbjct 132736 GATACAATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 132677 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||||||| | ||| || || ||| |||| |||| | ||| | | ||||| || Sbjct 132676 CAGCGACTTATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACACTCTCAGATTATAAT 132617 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||||||||| ||||| | || || |||| |||| || Sbjct 132616 ATTCAAAAAGAATCTACCCTGCACTTAGTTTTGCGACTTAGAGGAGG 132570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412496171949929