Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq12019 111 1e-19 >seq12019 Length=383594 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGA 34809 ||||| | | ||| || || || || |||| || ||| || || |||||||| || || Sbjct 132342 CCTCCTCGAAGCCTTAGAACAAGATGCAATGTTGA-CTCTTTTTGGATGTTATAATCAGA 132400 Query 34810 TAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGG 34869 || | || |||| |||| ||||| || || || || || | |||||| || | || Sbjct 132401 TAATGTACGTCCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGATCGGGTGG 132460 Query 34870 CACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGAC 34929 | ||||||||||| | |||||| |||||| | |||| | ||| ||| ||| || Sbjct 132461 AATGCCCTCCTTGTCTTGGATTTTTGCTTTGACATTTTCTATTGTATCACTGGGCTCAAC 132520 Query 34930 ATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | |||||||| ||||| || || || || |||||||||||||| Sbjct 132521 TTCTAATGTTATGGTTTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132568 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 34760 AACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGC 34819 ||||| ||||| | |||| ||| ||||||||||||||||| || || | | | || Sbjct 132807 AACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGA 132866 Query 34820 TCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCC 34879 |||| || | ||||||||| || || || || | || ||||| | || | || ||| Sbjct 132867 CCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCC 132926 Query 34880 TTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTT 34939 ||||| | || || ||| || | | || | ||| | | ||| || || | || Sbjct 132927 TTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACCTCCAAAGTG 132986 Query 34940 ATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| || || || || |||||||||||||| Sbjct 132987 ATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCAT 133024 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || ||||||||||||||||| |||| | ||| |||| |||| ||||| || || || Sbjct 132150 TCTTTCTGAATGTTATAGTCTGATAATGTACGCCCATCTTCCAACTGCTTACCAGCAAAT 132209 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || | || || || | || | || ||||| || | ||||| ||| || | Sbjct 132210 ATGAGCCTCTGTTGATCAGGTGGGATGCCTTCCTTATCTTGGATTTTAGCTTTCACATTT 132269 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| ||| || || || | || ||||||||||| || || || || ||| Sbjct 132270 TCAATTGTGTCACTGGGTTCAACTTCCAATGTAATGGTCTTTCCAGTAAGAGTTTTAACA 132329 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 132330 AAGATCTGCAT 132340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325420290086207