Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq12019 134 1e-26 >seq12019 Length=383594 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || ||||| || || || |||||||| ||||| || || |||| Sbjct 131886 CCTCCTCTCAACCTTAGTACCAAGTGCAGAGTCGATTCTTTCTGAATATTGTAGTCCGAT 131945 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | || || || ||| |||| | ||||| ||||| || ||| Sbjct 131946 AAAGTACGTCCATCCTCTAACTGCTTCCCTGCAAATATAAGCCTTTGTTGATCAGGAGGA 132005 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| ||||| || || | ||| ||| ||| |||||| || ||| | | || ||| Sbjct 132006 ATACCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCTATTGTATCACTAGGCTCAACT 132065 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| |||||||| ||||| | ||||||||||| |||||||| Sbjct 132066 TCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATCTGCAT 132112 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || || |||||||| ||||||||||| | | || || ||| || | || || ||| Sbjct 132372 GTTGACTCTTTTTGGATGTTATAATCAGATAATGTACGTCCATCTTCCAACTGCTTACCA 132431 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 ||| |||| | ||||||||||| || ||||| ||||| |||||||| | |||| |||| Sbjct 132432 GCAAATATAAGCCTTTGCTGATCGGGTGGAATGCCCTCCTTGTCTTGGATTTTTGCTTTG 132491 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 ||| |||||| || ||| | || ||||| | ||||| ||||| ||||| | ||| Sbjct 132492 ACATTTTCTATTGTATCACTGGGCTCAACTTCTAATGTTATGGTTTTTCCAGTAAGAGTT 132551 Query 29770 TTAACAAATATCTGCAT 29786 |||||||| |||||||| Sbjct 132552 TTAACAAAGATCTGCAT 132568 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || || | || ||||||||||| || || |||||||||||||| || || | Sbjct 131429 TCCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGA 131488 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || || ||| || || ||||| |||||| | || | ||| |||||||| || || Sbjct 131489 CAGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGG 131548 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||| ||||| | |||| ||| ||| |||| | |||||| | | || || Sbjct 131549 GATTCCTTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAAC 131608 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | || || ||||| || || | ||||| ||||| |||||||| Sbjct 131609 TTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || | |||| || || || || || |||||||||||||| |||||||| | Sbjct 132570 CCTCCTCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAG 132629 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | || || |||||| | || | || |||||||| || ||| Sbjct 132630 AGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGA 132689 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||||||||| |||||| | ||| ||| |||| | || ||| ||||||| Sbjct 132690 ATTCCTTCTTTGTCTTG-AATTTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTAC 132748 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| ||||| | || || |||||||||||||| Sbjct 132749 CTCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCAT 132796 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | | || || | |||||| || |||||||||||||| ||||| || | | Sbjct 131658 CCTCCCCTAAGCCTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAA 131717 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || | |||||| |||||| | || | | |||||||| || ||| Sbjct 131718 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGA 131777 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||| || || | |||| ||| || |||| | |||||| | ||||| Sbjct 131778 ATGCCTTCTTTATCCTGGATTTTTGCTTTCACGTTTTCAATGGTGTCACTGGGCTCTACC 131837 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || |||||||| | ||||| ||||| || ||||| Sbjct 131838 TCTAACGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || |||||||| |||||||| || |||||||||||||| | | ||| ||| ||| Sbjct 132813 AGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCATCT 132872 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || || ||| |||| | || || || || || ||||| || || |||||| Sbjct 132873 TCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTGTCT 132932 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||| ||| |||| | || ||| | || || || | ||| || ||| Sbjct 132933 TGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACCTCCAAAGTGATGGTT 132992 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| | ||||| ||||| ||||||||||| Sbjct 132993 TTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTT 133027 Score = 120 bits (132), Expect = 2e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 ||| || | ||| || || ||||| || |||||||||||||| | || ||| | ||| Sbjct 125417 CAGAACAAGATGCAGAGTAGATTCCTTCTGAATGTTATAATCAGAAAGGGTTCTGCCATC 125476 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || || || ||||||||| | || | | ||||||||| || ||||| || ||||| || Sbjct 125477 TTCAAGCTGCTTGCCAGCAAAAATAAGACGTTGCTGATCTGGAGGAATTCCTTCTTTATC 125536 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 ||| | |||| || ||| |||||| |||||| |||| |||||||||||||| || Sbjct 125537 TTGGATTTTTGCCTTCACATTTTCTATTGTGTCACTTGGTTCCACTTCAAGAGTTATCGT 125596 Query 29754 TTTGCCAGTTAAGGTTTTA 29772 || || | || ||||| Sbjct 125597 CTTACCTGCAAATATTTTA 125615 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | ||| || || |||||||| ||||||||||| || | | || || ||| Sbjct 132128 CAACACTAGATGCAGAGTAGATTCTTTCTGAATGTTATAGTCTGATAATGTACGCCCATC 132187 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | || || |||||| |||| | || || ||||| || || || || || || || Sbjct 132188 TTCCAACTGCTTACCAGCAAATATGAGCCTCTGTTGATCAGGTGGGATGCCTTCCTTATC 132247 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 ||| | ||| ||| ||| |||| | |||||| |||| ||||| | || || || Sbjct 132248 TTGGATTTTAGCTTTCACATTTTCAATTGTGTCACTGGGTTCAACTTCCAATGTAATGGT 132307 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| | ||||||||||| |||||||| Sbjct 132308 CTTTCCAGTAAGAGTTTTAACAAAGATCTGCAT 132340 Score = 100 bits (110), Expect = 2e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 || || || |||||||| ||||| || | | || | ||| || || || || ||| Sbjct 131158 GTTGACTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCATCTTCTAGCTGCTTACCA 131217 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 ||| | ||||| || |||||||| || |||||||| ||||| ||||||| |||| ||| Sbjct 131218 GCAAAAATCAACCTCTGCTGATCTGGTGGAATACCTTCTTTATCTTGTATTTTTGCTTTA 131277 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCC 29759 ||| |||| | ||| ||| | || ||||| | ||||||||||| || Sbjct 131278 ACATTTTCAATAGTATCACTGGGCTCGACTTCCAACGTTATAGTTTTACC 131327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384896883845073