Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq3665 91.5 2e-13 seq21116 84.2 3e-11 >seq3665 Length=121976 Score = 91.5 bits (100), Expect = 2e-13 Identities = 143/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 165161 TTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAAC 165220 ||||||||||||| ||| ||| | |||||| || || ||| |||| | |||||||||| Sbjct 35972 TTAAAGTTGCTCAGTTAGCTGGATCTGTTGCTGAGCATTCAGCTTATCATCATGGTGAAC 35913 Query 165221 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATA-TA 165279 || || || || || || || | || || | ||||| |||| || |||| || Sbjct 35912 AATCATTGAATGGGACAATCATAAACCTGGCTCAGAACTTTGTGGGTAGTAACAATATTA 35853 Query 165280 GCATTACTTG-AACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGC 165338 |||| ||| ||| |||||||||||| || || || |||| || |||||| | || Sbjct 35852 ACATT--TTGCTTCCTATTGGTCAATTTGGCACTAGGTTGCAAGGTGGCAAAGATGCCGC 35795 Query 165339 GGCATCAAGATATATTTATAC 165359 | | |||||||||| ||| Sbjct 35794 GAGTCCCAGATATATTTTTAC 35774 >seq21116 Length=531285 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 50407 ACATTTAAAATGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 50466 ||||||| |||||||||| | |||| | | | |||||||| || |||||||| |||||| Sbjct 36089 ACATTTAGAATGAATTTAAGTGTGACCACACCGTATAATGCAGACTTTGATGGTGATGAA 36030 Query 50467 ATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAATTACAAGAA 50517 |||||| | ||||| ||||| || || | | |||||| | |||||| Sbjct 36029 ATGAATCTTCATGTCCCTCAGTCTCTTGAAACACGAGCTGAAGTTCAAGAA 35979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627991818094080