Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq3665 84.2 2e-11 >seq3665 Length=121976 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 146375 TTAAAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAG 146434 |||||| || | || ||| ||| | ||| || ||||| | | ||| | || || || Sbjct 35972 TTAAAGTTG-CTCAGTTAGCTGGATCTGTTGCTGAGCATTCAGCTTATCATCATGGTGAA 35914 Query 146435 CAAAACTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATC 146494 ||| ||| | ||| ||||| || | || ||| | |||||||| || || ||||| Sbjct 35913 CAATCATTGAATGGGACAATCATAAACCTGGCTCAGAACTTTGTGGGTAGTAACAATATT 35854 Query 146495 CCCCTTCT-CTACCAGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCA 146553 | || | || || ||| ||||| || || |||||| |||| || || || || || Sbjct 35853 AACATTTTGCTTCCTATTGGTCAATTTGGCACTAGGTTGCAAGGTGGCAAAGATGCCGCG 35794 Query 146554 AGTCCCAGATATATTTTCAC 146573 ||||||||||||||||| || Sbjct 35793 AGTCCCAGATATATTTTTAC 35774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521098029124040