Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq15467 127 5e-24 seq3665 104 6e-17 seq21116 98.7 2e-15 seq21733 89.7 1e-12 seq3821 89.7 1e-12 >seq15467 Length=153806 Score = 127 bits (140), Expect = 5e-24 Identities = 129/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 110988 TATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATC 111047 |||||||||||||||| ||| | |||||| || ||| ||| | | |||| ||| Sbjct 76565 TATGAAAAAGAAGGCAGGTTCAGAAAACAAGTTAAAGCGCAATCATTATGGTATGCAATT 76506 Query 111048 CTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGC 111107 ||||||| || ||||||| ||||| || ||||| |||||||||||| | |||||| Sbjct 76505 ATTGAATCTCAGATTGAAACAGGAACCCCATATATGTTGTATAAAGATGCTTGTAATCGA 76446 Query 111108 AAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 ||||| ||||||| |||||||||||| || ||| |||||| | ||| Sbjct 76445 AAATCAAATCAAAAGAATTTAGGAACCATACAGTGCAGTAATCTATGC 76398 >seq3665 Length=121976 Score = 104 bits (114), Expect = 6e-17 Identities = 132/178 (74%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 279065 GGTATTCCAAAACTTGATGATGCAAACTGGGCTGGAGGTCGTAAATCTCAA--GAATGTG 279122 ||||||||||| ||||| |||||||| ||||| || |||| |||| || ||| Sbjct 36888 GGTATTCCAAAGCTTGAAGATGCAAATGATGCTGGTACCCG-AAAT-TCAATTGACTGTA 36831 Query 279123 CTTTATTTCTTACTGAGGGAGATTCTGCTGCTACATTTGCGATTGCTGGTTTATCTGTTA 279182 ||||| || | ||||| |||||||| ||| |||| || | |||| ||| |||| Sbjct 36830 CTTTAATTTTAACTGAAGGAGATTCAGCTAAGTCATTAGCTGTATCTGGCTTAGGTGTTG 36771 Query 279183 TTGGTCGTGATAAATATGGCGTATTTCCTTTAAGAGGTAAAGTAATTAATGCTCGTGA 279240 ||||||||||||||| ||| |||||||| | | ||||||| | | |||| ||||| Sbjct 36770 TTGGTCGTGATAAATTTGGAATATTTCCTCTTAAAGGTAAAATCTTAAATGTACGTGA 36713 >seq21116 Length=531285 Score = 98.7 bits (108), Expect = 2e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395 || ||||||||||| | |||| |||||||||||||||| |||| | ||| ||| Sbjct 36158 TTTAATAGGCAACCTACTTTGCACAAAATGTCTATGATGGGTCATCGCATACGAGTTTTA 36099 Query 305396 TCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGAT 305455 | | | |||||| || | ||| |||||| || || |||||||| || |||||| Sbjct 36098 CCATGGTCTACATTTAGAATGAATTTAAGTGTGACCACACCGTATAATGCAGACTTTGAT 36039 Query 305456 GGAGATGAAATGAATATGCATGTACCTCAATC 305487 || |||||||||||| | ||||| ||||| || Sbjct 36038 GGTGATGAAATGAATCTTCATGTCCCTCAGTC 36007 >seq21733 Length=159745 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 305404 GACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGA 305463 |||||||| ||| |||| | ||| ||| || || |||||||| ||||||||||| ||||| Sbjct 25667 GACATTTCAATTTAATGAATGTGTTTGCACTCCATATAATGCTGATTTTGATGGGGATGA 25726 Query 305464 AATGAATATGCATGTACCTCAATCAAAGG 305492 ||||||||| ||| | || ||| || ||| Sbjct 25727 AATGAATATTCATCTGCCACAAACAGAGG 25755 >seq3821 Length=102291 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 131433 TATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCT 131492 ||||||| ||| | |||| ||| | | | |||||||| || ||| || | |||| Sbjct 85065 TATTTCCCATTGAGTATCAAGATATATGGCAGATGTATAAAAAGGCTGAAGCTTCGTTCT 85006 Query 131493 GGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAAC-CTTG 131551 |||||| |||||| | || | | |||||| | | ||||||||||| |||| | | Sbjct 85005 GGACTGCTGAAGAAGTTGACTTATCAAAAGATCTAGGAGATTGGGAAAAGTTAAAGCCCG 84946 Query 131552 AATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCATTGTT 131611 || ||||| | ||| |||| | || | ||||| || || | |||||||||||||| Sbjct 84945 AA-GAAAAGCACTTTATTTCACACATTTTAGCATTTTTTGCAGCGAGTGATGGCATTGTG 84887 Query 131612 ATTGAAAATCTTGTTATT 131629 | ||||||| | || ||| Sbjct 84886 AATGAAAATTTGGTAATT 84869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185768859804533