Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq12019 111 1e-19 >seq12019 Length=383594 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| | || || || || || || || |||||||| || || ||||| || Sbjct 132569 ACCTCCTCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGA 132628 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 |||||| ||| | || ||||| || ||||| ||||| || | ||||||||||| | || Sbjct 132629 GAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGG 132688 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| |||||| | || |||| || | || || || | ||| | Sbjct 132689 AATTCCTTCTTTGTCTTGAATTTT-AGCTTTTACATTTTCAATTGTATCACTGGGTTCTA 132747 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| || || | || || ||||| ||||||||| Sbjct 132748 CCTCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCATA 132797 Score = 89.7 bits (98), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 |||||||| || || || || || || || || | || || |||||||| || ||||| Sbjct 131694 TCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCTAATTGTTTACCAGCAAAG 131753 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | |||||||||||| | || | |||||||| || ||||| || || || | Sbjct 131754 ATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGGATTTT-TGCTTTCACGTT 131812 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | |||||| || | || || || | ||| || || || || || | |||||||| Sbjct 131813 TTCAATGGTGTCACTGGGCTCTACCTCTAACGTAATGGTCTTGCCAGTAAGAGTTTTTAC 131872 Query 33738 AAAGATCTGCATA 33750 ||| || |||||| Sbjct 131873 AAAAATTTGCATA 131885 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 || ||||| |||||| || || || ||||| ||||| || | || || | || || Sbjct 132816 ACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGACAAGGTTCGACCATCTTCT 132875 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 ||||| ||||| ||||| || | | ||| || || | || | ||||| ||||| Sbjct 132876 AATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGAATTCCTTCCTTGTCTTGG 132935 Query 33661 ATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || ||| | ||| ||| ||| || |||| ||||| || | ||||| ||||| Sbjct 132936 ATCTTAGCTTTTA-CATTTTCAATGGTATCACTTGGCTCCACCTCCAAAGTGATGGTTTT 132994 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| |||||||||||||| Sbjct 132995 TCCAGTAAGTGTTTTCACAAAGATCTGCAT 133024 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||||||||| ||||| ||||| || | ||| ||| | || ||||| || || || ||||| Sbjct 132377 CTCTTTTTGGATGTTATAATCAGATAATGTACGTCCATCTTCCAACTGCTTACCAGCAAA 132436 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | | |||||||| | || | || || ||||| ||||| || || |||| Sbjct 132437 TATAAGCCTTTGCTGATCGGGTGGAATGCCCTCCTTGTCTTGGATTTT-TGCTTTGACAT 132495 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 || | || || || | || || || | || || ||||| || || | ||||| | Sbjct 132496 TTTCTATTGTATCACTGGGCTCAACTTCTAATGTTATGGTTTTTCCAGTAAGAGTTTTAA 132555 Query 33737 CAAAGATCTGCATA 33750 |||||||||||||| Sbjct 132556 CAAAGATCTGCATA 132569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328428970589760