Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq12019 138 3e-27 >seq12019 Length=383594 Score = 138 bits (152), Expect = 3e-27 Identities = 164/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || |||||||| ||||||||||| || ||| ||| Sbjct 132793 CAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGTGAT 132734 Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| ||||| || ||| |||||||| |||||||||||| || || || Sbjct 132733 ACAATTGAAAATGTAAAAGCTAAA-ATTCAAGACAAAGAAGGAATTCCTCCTGATCAGCA 132675 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||||||| || ||||||||||||||||||||| | || | | ||||| || | Sbjct 132674 GCGACTTATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACACTCTCAGATTATAATAT 132615 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||| ||||| || ||| | |||||| ||||| || Sbjct 132614 TCAAAAAGAATCTACCCTGCACTTAGTTTTGCGACTTAGA 132575 Score = 136 bits (150), Expect = 9e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || |||||||||||||| || || ||||| || | |||| Sbjct 131653 CAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGTGAC 131594 Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || ||||| ||||| |||||| || ||||| ||||||||||| || || || Sbjct 131593 ACCATCGAAAATGTAAAAGCAAAA-ATCCAAGATAAAGAAGGAATCCCTCCAGATCAGCA 131535 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||||||| || || || || ||| | |||||||| | ||| || | || |||||| | Sbjct 131534 GAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAACAT 131475 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || ||||||||||||||||| | ||||||||| Sbjct 131474 TCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGA 131441 Score = 114 bits (126), Expect = 3e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| || ||||| ||| | ||||||||| ||||||| | ||| || ||| || Sbjct 125604 CAGGTAAGACGATAACTCTTGAAGTGGAACCAAGTGACACAATAGAAAATGTGAAGGCAA 125545 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 | || ||||| |||||||||||| || || ||| | ||||| || || || |||| Sbjct 125544 AAATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAACGTCTTATTTTTGCTGGCAAGC 125485 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 || | |||||||| || || | | ||||| ||| | ||||| || |||||||| || | Sbjct 125484 AGCTTGAAGATGGCAGAACCCTTTCTGATTATAACATTCAGAAGGAATCTACTCTGCATC 125425 Query 206375 TTGTTTTGAGACTTCG 206390 ||||| ||||||| || Sbjct 125424 TTGTTCTGAGACTCCG 125409 Score = 114 bits (126), Expect = 3e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || |||||||| || || || ||||| || ||| Sbjct 132565 CAGATCTTTGTTAAAACTCTTACTGGAAAAACCATAACATTAGAAGTTGAGCCCAGTGAT 132506 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| || ||||||||| || ||||| || || || ||| || || || Sbjct 132505 ACAATAGAAAATGTCAAAGCAAAA-ATCCAAGACAAGGAGGGCATTCCACCCGATCAGCA 132447 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| ||||| || || || |||||||||||||||||| | || || | ||||| ||| | Sbjct 132446 AAGGCTTATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACATTATCTGATTATAACAT 132387 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||| |||||||| || | || |||||| | || |||||| Sbjct 132386 CCAAAAAGAGTCAACATTGCATCTTGTTCTAAGGCTTCGA 132347 Score = 111 bits (122), Expect = 4e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || || ||||| || || || |||||||| ||| |||| Sbjct 132337 CAGATCTTTGTTAAAACTCTTACTGGAAAGACCATTACATTGGAAGTTGAACCCAGTGAC 132278 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| || ||||| ||| || ||||| || ||||| || || || || Sbjct 132277 ACAATTGAAAATGTGAAAGCTAAA-ATCCAAGATAAGGAAGGCATCCCACCTGATCAACA 132219 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || || || || || ||||||||||||||||| | || || | || || ||| | Sbjct 132218 GAGGCTCATATTTGCTGGTAAGCAGTTGGAAGATGGGCGTACATTATCAGACTATAACAT 132159 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 |||||||| |||||||| || || || ||||| |||||| Sbjct 132158 TCAGAAAGAATCTACTCTGCATCTAGTGTTGAGGCTTCGA 132119 Score = 111 bits (122), Expect = 4e-19 Identities = 153/212 (72%), Gaps = 9/212 (4%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA- 206222 |||||| ||||| ||| ||||| || || |||||||| ||||||||||| ||||| Sbjct 133027 AAAATG---CAGATCTTTGTGAAAACACTTACTGGAAAAACCATCACTTTGGAGGTGGAG 132971 Query 206223 --AAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTG 206280 ||| ||| || | ||| ||||| ||||| ||||| || ||||||||| Sbjct 132970 CCAAG---TGATACCATTGAAAATGTAAAAGCTAAGATCCAAGACAAGGAAGGAATTCCT 132914 Query 206281 CCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCC 206340 || ||| || || || || || || |||||||| || |||||||| | || ||| | Sbjct 132913 CCTGACCAACAGAGGCTAATATTTGCAGGAAAGCAATTAGAAGATGGTCGAACCTTGTCT 132854 Query 206341 GATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||||| ||| | ||||| || || |||||||| Sbjct 132853 GATTATAACATTCAGAAGGAATCCACTCTTCA 132822 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| || | |||||| || | || |||||||| |||| ||||| |||| || || Sbjct 132347 TCGAAGCCTTAGAACAAGATGCAATGTTGACTCTTTTTGGATGTTATAATCAGATAATGT 132406 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||| |||||| || || || ||||||| ||| ||| Sbjct 132407 ACGTCCATCTTCCAACTGCTTACCAGCAAATATAAGCCTTTGCTGA 132452 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 || ||||| |||||| | ||| || ||||| ||||| || | |||||| || | | || Sbjct 132575 TCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAGAGTGT 132634 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||||| ||||||||| || |||||||| || || ||| Sbjct 132635 ACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGA 132680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180781250850413