Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq12019 141 9e-29 >seq12019 Length=383594 Score = 141 bits (156), Expect = 9e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 |||||||||||| | | ||||||||||||||||||||||| || ||||| ||| Sbjct 131444 CAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATC 131503 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| |||||||| || | | | || || | ||| ||||||||||| || ||||||||||| Sbjct 131504 TTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCTTTATC 131563 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | ||| | || || | ||||| ||||| | || | ||| Sbjct 131564 TTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAATCGT 131623 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| || || |||||||| | ||||||||||| Sbjct 131624 TTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 116 bits (128), Expect = 4e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||||||||| || ||||| | ||||| |||||| | |||||||| | | Sbjct 131691 GATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCTAATTGTTTACCAGCA 131750 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| ||||| || || |||||||||||||| |||||| ||||| Sbjct 131751 AAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGGATTTTTGCTTTCACG 131810 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | ||||| || || | ||| | || || ||||| ||||||||| Sbjct 131811 TTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTAATGGTCTTGCCAGTAAGAGTTTTT 131870 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 131871 ACAAAAATTTGCAT 131884 Score = 104 bits (114), Expect = 2e-17 Identities = 140/189 (74%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAAT 131969 |||||| | ||||| ||||||| |||||||| || ||||| | | ||| | || | | Sbjct 131142 CAAAACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCTGATAATGTTCTGCCA-T 131200 Query 131970 CTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTAT 132029 |||| ||||| ||||| | | | || | | ||| |||||||| || || |||||||||| Sbjct 131201 CTTCTAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATACCTTCTTTAT 131260 Query 132030 C-GGTAATTTTTTGTTTCAAC-TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAG 132087 | ||| |||||| || ||| | ||| | |||||| | ||||| ||||| | ||| | Sbjct 131261 CTTGTA--TTTTTGCTTTAACATTTTCAATAGTATCACTGGGCTCGACTTCCAACGTTAT 131318 Query 132088 CGTTTTACC 132096 |||||||| Sbjct 131319 AGTTTTACC 131327 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||| || || | | | || ||||||||||| || || || | ||||| | Sbjct 132582 CGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAGAGTGTACGTCCA 132641 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||| || || | | |||| || ||||| ||||| ||||| || |||||||| Sbjct 132642 TCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGAATTCCTTCTTTG 132701 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| ||| | | ||| | ||||| | || || || || | || | Sbjct 132702 TCTTGAATTTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTACCTCCAAAGTGATG 132761 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||||||||| || | || |||||||| Sbjct 132762 GTTTTTCCAGTCAGAGTCTTCACAAATATCTGCAT 132796 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| ||||| |||||||| | ||||| ||| || | ||| || || | | Sbjct 131919 GATTCTTTCTGAATATTGTAGTCCGATAAAGTACGTCCATCCTCTAACTGCTTCCCTGCA 131978 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | |||||||| ||||| || ||||||||||| ||||| ||| | Sbjct 131979 AATATAAGCCTTTGTTGATCAGGAGGAATACCTTCTTTATCCTGGATTTTAGCTTTAACA 132038 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||||| | ||||| ||||| | || | ||||||||||| |||||||| Sbjct 132039 TTTTCTATTGTATCACTAGGCTCAACTTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTA 132098 Query 132110 ATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 132099 ACAAAAATCTGCAT 132112 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAATCTTCGAGCTGTTTACCG 131986 ||||||||||||| ||||| || || | | || ||||| |||||| | ||| ||||| Sbjct 132373 TTGACTCTTTTTGGATGTTATAATCAGATAAT-GTACGTCCATCTTCCAACTGCTTACCA 132431 Query 131987 GAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTC 132046 | | | || || | || ||||| || || ||||| || || || |||||| ||| Sbjct 132432 GCAAATATAAGCCTTTGCTGATCGGGTGGAATGCCCTCCTTGTCTTGGATTTTTGCTTTG 132491 Query 132047 AACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTT 132106 | | ||| | ||||| | ||||| ||||| | || | ||||| ||||| |||||| Sbjct 132492 ACATTTTCTATTGTATCACTGGGCTCAACTTCTAATGTTATGGTTTTTCCAGTAAGAGTT 132551 Query 132107 TTTATGAAAATCTGCAT 132123 || | || |||||||| Sbjct 132552 TTAACAAAGATCTGCAT 132568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476202190141080