Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq12019 120 3e-22 >seq12019 Length=383594 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| | || |||||| |||| || | ||||| || | | Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | |||||| |||||| |||||||| || || || || |||||| Sbjct 131596 GACACCATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATCAG 131537 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || ||||| |||| | || ||||| || ||||||| | | | | || ||||| Sbjct 131536 CAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAAC 131477 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 ||||||||||| || || ||||||| || || ||||| ||||| |||| Sbjct 131476 ATTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATTAAGAGGTGGAA 131428 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||||||||| | || || || | || ||| | || || || ||| Sbjct 131884 ATGCAAATTTTTGTAAAAACTCTTACTGGCAAGACCATTACGTTAGAGGTAGAGCCCAGT 131825 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || ||| |||||| |||||||| || || || || |||||| Sbjct 131824 GACACCATTGAAAACGTGAAAGCAAAAATCCAGGATAAAGAAGGCATTCCACCTGATCAG 131765 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | || || | | || |||||| | ||||||| | | | | | || || ||| Sbjct 131764 CAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCAGACTATAAT 131705 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| ||| ||||| |||| |||| | || ||||| Sbjct 131704 ATTCAAAAAGAATCTACCCTTCATCTAGTCCTAAGGCTTAGGGGAGG 131658 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || | || |||||| | ||||| | || || ||| ||| Sbjct 132796 ATGCAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGT 132737 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | |||||| |||||| || ||||| || || || || |||||| Sbjct 132736 GATACAATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 132677 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || |||| || | | || || || | ||||||| | | || ||||| ||| Sbjct 132676 CAGCGACTTATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACACTCTCAGATTATAAT 132617 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| ||| | || ||||| || || | |||||||| Sbjct 132616 ATTCAAAAAGAATCTACCCTGCACTTAGTTTTGCGACTTAGAGGAGG 132570 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 25202 GGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAA 25261 || ||| | || ||| | |||||||| ||| |||||||| || | || ||| |||| Sbjct 131327 GGTAAAACTATAACGTTGGAAGTCGAGCCCAGTGATACTATTGAAAATGTTAAAGCAAAA 131268 Query 25262 ATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAA 25321 || |||||||| ||||| || || |||||||| || | |||| | || || || Sbjct 131267 ATACAAGATAAAGAAGGTATTCCACCAGATCAGCAGAGGTTGATTTTTGCTGGTAAGCAG 131208 Query 25322 CTCGAAGATGATAGAAA--TGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATT 25379 || ||||||| |||| | |||| | || ||||||||||| || || || | ||| Sbjct 131207 CTAGAAGATGGCAGAACATTATCAG--ACTATAATATTCAAAAGGAGTCAACATTACATC 131150 Query 25380 TAGTGTTAAGATTGAGAGGAGG 25401 | || || || ||||||| || Sbjct 131149 TTGTTTTGAGGCTGAGAGGTGG 131128 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| ||||| | || || ||| | ||||| | ||||| || | | Sbjct 132112 ATGCAGATTTTTGTTAAAACTCTTACTGGTAAAACTATCACTTTAGAAGTTGAGCCTAGT 132053 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || || | || ||| ||||| |||||||| ||||| || || ||||| Sbjct 132052 GATACAATAGAAAATGTTAAAGCTAAAATCCAGGATAAAGAAGGTATTCCTCCTGATCAA 131993 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| || || | | || || || | || |||| | | | | || |||||| Sbjct 131992 CAAAGGCTTATATTTGCAGGGAAGCAGTTAGAGGATGGACGTACTTTATCGGACTACAAT 131933 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| |||||||| || | || || || |||| ||||||||||| Sbjct 131932 ATTCAGAAAGAATCGACTCTGCACTTGGTACTAAGGTTGAGAGGAGG 131886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444712436676960