Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq12019 132 4e-26 >seq12019 Length=383594 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||||||| | || ||||| | || ||||| |||||||| ||||| | | Sbjct 132798 CCACCACGTAACCTGAGGACTAAATGAAGAGTGGATTCCTTCTGAATGTTATAATCAGAC 132857 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 |||||||| | || || | ||||| || |||||||| | || ||| ||||| | |||| Sbjct 132858 AAGGTTCGACCATCTTCTAATTGCTTTCCTGCAAATATTAGCCTCTGTTGGTCAGGAGGA 132917 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||| |||||| || | | || | | || || || | |||||| Sbjct 132918 ATTCCTTCCTTGTCTTGGATCTTAGCTTTTACATTTTCAATGGTATCACTTGGCTCCACC 132977 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 |||| ||||| ||||| || || | ||||||||||| ||||||||| || Sbjct 132978 TCCAAAGTGATGGTTTTTCCAGTAAGTGTTTTCACAAAGATCTGCATTTTG 133028 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | ||| ||||| |||||||| | ||| ||| |||||||||||||| || | Sbjct 131428 TTCCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAG 131487 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || || || | || || ||||| || || ||||| || | | |||||| || | || Sbjct 131488 ACAGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAG 131547 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 | | | || || || ||| |||||| || | | || | | ||||| || | || Sbjct 131548 GGATTCCTTCTTTATCTTGGAT-TTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCA 131606 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || |||||||| || || | |||||||||||| |||||||| Sbjct 131607 ACTTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || |||||||| || ||||| | | || || | || |||| |||||| || ||||| Sbjct 132606 TCTTTTTGAATATTATAATCTGAGAGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAG 132665 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGT 35664 || | |||||||| || | ||||| | || ||||| ||| ||| |||| | | | Sbjct 132666 ATAAGTCGCTGCTGATCAGGAGGAATTCCTTCTTTGTCT-TGAATTTTAGCTTTTACATT 132724 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | || || || | ||| ||||||| ||||| ||||| || |||| ||| ||||| Sbjct 132725 TTCAATTGTATCACTGGGTTCTACCTCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCAC 132784 Query 35725 AAATATCTGCAT 35736 |||||||||||| Sbjct 132785 AAATATCTGCAT 132796 Score = 86.0 bits (94), Expect = 6e-12 Identities = 141/201 (70%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | | |||||| || | |||||| || |||||||||||| || || || | Sbjct 131128 CCACCTCTCAGCCTCAAAACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCTGAT 131187 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || || ||||||||||| ||||| ||||||| |||||| || | ||| Sbjct 131188 AATGTTCTGCCATCTTCTAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 131247 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | || ||| | || |||||| || | | || | | || || || | || || Sbjct 131248 ATAC-CTTCTTTATCTTGTATTTTTGCTTTAACATTTTCAATAGTATCACTGGGCTCGAC 131306 Query 35689 CTCCACCGTGATCGTTTTACC 35709 |||| ||| || |||||||| Sbjct 131307 TTCCAACGTTATAGTTTTACC 131327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450406745837240