Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq12019 107 2e-18 >seq12019 Length=383594 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| ||||| | || ||| || | || || || || || ||||||||||||||||| Sbjct 131428 TTCCACCTCTTAATCTCAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAG 131487 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | || || |||||||| || |||||||| | | ||||||||| || | Sbjct 131488 ACAGAGTACGGCCATCTTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAG 131547 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || |||||||| ||||| |||||| ||| || || | ||||| | || | Sbjct 131548 GGATTCCTTCTTTATCTTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAA 131607 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | ||||| ||||| || || | |||||| || ||||| ||||| Sbjct 131608 CTTCTAATGTAATCGTTTTTCCTGTAAGAGTTTTCACAAAAATCTGCAT 131656 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || || | | || || || || || ||||| |||||||| || ||||| | Sbjct 131658 CCTCCCCTAAGCCTTAGGACTAGATGAAGGGTAGATTCTTTTTGAATATTATAGTCTGAA 131717 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || | ||||| || ||||| || | |||||||||||| || || Sbjct 131718 AGAGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGA 131777 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665 ||||||||||| || || |||||| ||| | || | |||| ||||| | || || Sbjct 131778 ATGCCTTCTTTATCCTGGATTTTTGCTTTCA-CGTTTTCAATGGTGTCACTGGGCTCTAC 131836 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||||| || || || | |||||| || ||||||||||| Sbjct 131837 CTCTAACGTAATGGTCTTGCCAGTAAGAGTTTTTACAAAAATTTGCAT 131884 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| |||||||| || | ||| || || ||||| |||||||| || || || Sbjct 132570 CCTCCTCTAAGTCGCAAAACTAAGTGCAGGGTAGATTCTTTTTGAATATTATAATCTGAG 132629 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || | ||| || || ||||| || | ||||||||||| || || Sbjct 132630 AGTGTACGTCCATCTTCCAACTGCTTTCCAGCAAAGATAAGTCGCTGCTGATCAGGAGGA 132689 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||||||||| ||| || || | ||| || | ||| || Sbjct 132690 ATTCCTTCTTTGTCTTGAATTTTAGCTTTTACATTTTCAATTGTATCACTGGGTTCTACC 132749 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| |||||||| || || | ||| || || || || ||||| Sbjct 132750 TCCAAAGTGATGGTTTTTCCAGTCAGAGTCTTCACAAATATCTGCAT 132796 Score = 98.7 bits (108), Expect = 1e-15 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || | ||| || || |||| || || ||||||||||| || ||||| | Sbjct 131128 CCACCTCTCAGCCTCAAAACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCTGAT 131187 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || | || || ||||| || || ||||||||||| | ||||||||| || || Sbjct 131188 AATGTTCTGCCA-TCTTCTAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGTGG 131246 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 || |||||||| ||||| |||||| ||| || Sbjct 131247 AATACCTTCTTTATCTTGTATTTTTGCTTTAAC 131279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504964686045560