Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq15467 118 9e-22 seq12019 116 3e-21 >seq15467 Length=153806 Score = 118 bits (130), Expect = 9e-22 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 131607 ATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAAT 131666 |||| | |||||||||| ||||| ||| || ||| ||||| |||||||| |||| Sbjct 76911 ATTCATTTGGACACATTAAACTCCACATTTCGTCCTTTTCTACTCGTTTCATAAATAAAT 76970 Query 131667 CCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttt 131726 | || | ||| || || || ||||||||||| || | | ||||||| | || || | | Sbjct 76971 CTGGAATCCACAATGCATAAAACAGATCTCTGGCCCTCTGCTCTTCTTTGCCAGTATTCT 77030 Query 131727 ttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 | || |||| ||||||||| || ||||| |||||||| || || ||||| | ||| Sbjct 77031 TCTTTAAATCTAAAAAGTCAAATATGTCTGCATGCCAAGGCTCTAAATAAATTGC 77085 >seq12019 Length=383594 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| |||||||| | ||||| ||||||||||| |||||||| || | || | || Sbjct 131444 CAAAACCAAATGAAGAGTAGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGGCCATC 131503 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| |||||||| || || |||| || | ||| ||||| || || | || |||||||| Sbjct 131504 TTCAAGCTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCTGGAGGGATTCCTTCTTTATC 131563 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 ||| || ||| | |||| | ||||| | | |||||||||| || || | Sbjct 131564 TTGGATTTTTGCTTTTACATTTTCGATGGTGTCACTAGGCTCAACTTCTAATGTAATCGT 131623 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 ||| || || |||||||||||||| || |||||| || Sbjct 131624 TTTTCCTGTAAGAGTTTTCACAAAAATCTGCATACCT 131660 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| |||||||||||||| ||||| | | || | ||||| | |||||||| Sbjct 131688 GTAGATTCTTTTTGAATATTATAGTCTGAAAGAGTACGACCATCTTCTAATTGTTTACCA 131747 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || |||||||| ||||| || || | || |||||||| ||| || |||| Sbjct 131748 GCAAAGATAAGACGCTGCTGATCAGGTGGAATGCCTTCTTTATCCTGGATTTTTGCTTTC 131807 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | |||| | ||||| ||| || || |||| || || | ||||| || |||||| Sbjct 131808 ACGTTTTCAATGGTGTCACTGGGCTCTACCTCTAACGTAATGGTCTTGCCAGTAAGAGTT 131867 Query 27231 TTCACAAAGATTTGCATAGCTGCT 27254 || ||||| ||||||||| || || Sbjct 131868 TTTACAAAAATTTGCATACCTCCT 131891 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGT-CGCT 27079 ||||| | ||||| | |||||| || | || || ||||| ||||||||||||| || | Sbjct 131886 CCTCCTCTCAACCTTAGTACCAAGTGCAGAGTCGATTCTTTCTGAATATTGTAGTCCGAT 131945 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | | || | || || | ||| || || || | || || | |||||||| || || Sbjct 131946 AAAG-TACGTCCATCCTCTAACTGCTTCCCTGCAAATATAAGCCTTTGTTGATCAGGAGG 132004 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| |||||||| ||| || ||| | |||||| || || | | ||||| Sbjct 132005 AATACCTTCTTTATCCTGGATTTTAGCTTTAACATTTTCTATTGTATCACTAGGCTCAAC 132064 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||| |||| ||| || || |||||||| ||||| || ||||| Sbjct 132065 TTCTAAAGTGATAGTTTTACCAGTAAGAGTTTTAACAAAAATCTGCAT 132112 Score = 89.7 bits (98), Expect = 4e-13 Identities = 143/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-G 27077 |||| || | || || ||| || | |||||| || || || ||||||||||| ||||| | Sbjct 131126 TGCCACCTCTCAGCCTCAAAACAAGATGTAATGTTGACTCCTTTTGAATATTATAGTCTG 131185 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | ||||| || | ||||| ||||| ||||| || |||| | | ||| ||||| || Sbjct 131186 ATAATGTTCTGC-CATCTTCTAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCTGGT 131244 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | ||| |||||||| || || ||| | |||| | ||| || ||| || Sbjct 131245 GGAATACCTTCTTTATCTTGTATTTTTGCTTTAACATTTTCAATAGTATCACTGGGCTCG 131304 Query 27198 ACTTCTAGAGTTATAGATTTGCC 27220 ||||| | ||||||| ||| || Sbjct 131305 ACTTCCAACGTTATAGTTTTACC 131327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424578853802136