Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq3665 95.1 6e-15 >seq3665 Length=121976 Score = 95.1 bits (104), Expect = 6e-15 Identities = 334/513 (65%), Gaps = 23/513 (4%) Strand=Plus/Plus Query 64883 GTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGT 64942 ||||| |||| || |||||||| | || ||||||| | || ||| ||||| ||||| Sbjct 35612 GTACTCCATCCAGTTCCAATACCTTCTGCTCCATTTACAAGAACCATGGGAATGATTGGC 35671 Query 64943 GCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAATGGCATCA 65002 |||| | ||| |||| | | | |||||||| || || || |||| | | | Sbjct 35672 ACATAGTACTCAGGTTCAATTTTTAAATTATCATCATACAGATGTTTTAAAAGAGGAGTA 35731 Query 65003 TCCTCTTTTGGAAATATAGAACGAGTTATTTTAT-----TCAATTGAGTATAAATATATC 65057 || |||| |||||| | ||| | | |||| |||| ||||||||| Sbjct 35732 TCAAGATTTGAAAATAT-----GTGTTTTGCCAAAGGGCTCAACATAGTAAAAATATATC 35786 Query 65058 TTTCGGATGCGTGG--TCTTGTCCAGTTCGT---CGTGTTCCAAACTGACCATTTGGCAT 65112 | ||| || || |||| ||| | | | || ||||| |||||| | || | Sbjct 35787 TG--GGACTCGCGGCATCTTTGCCACCTTGCAACCTAGTGCCAAATTGACCAATAGGAAG 35844 Query 65113 TAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATT 65172 || | ||||||||||| ||| | ||| |||||||||| || |||| |||| Sbjct 35845 CAAAATGTTAATATTGTTACTACCCACAAAGTTCTGAGCCAGGTTTATGATTGTCCCATT 35904 Query 65173 TAAACTCGCTTCACCGTGATGATATCCTGAATGTTCAGAGACATATCCACTAAATTGAGC 65232 || |||||| |||||||| ||||||| |||| ||| ||||| || ||||| Sbjct 35905 CAATGATTGTTCACCATGATGATAAGCTGAATGCTCAGCAACAGATCCAGCTAACTGAGC 35964 Query 65233 AACTTTTATTTC-CGTTGTTAAATTCTTTTTAAATGC-AGAATACAATATTTTCCGTAAA 65290 |||||| | ||| |||| | | ||| ||| ||| | || |||||| | ||| || Sbjct 35965 AACTTTAACTTCTCGTTTATCATTTCGTTT--AATACAAGTATACAAGACTTTACGCTGC 36022 Query 65291 CTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGAAA 65350 | | ||| || || || | | |||||| || ||| ||| || ||| ||| Sbjct 36023 CCAGGTTTTAACCCGTCAACAACCGAAGGAATAGATCGTTCATTATC-CATGTTGCTAAA 36081 Query 65351 T-GTATGAATTCTTTGTTAATAAATTCTTCATA 65382 | || ||||||||||||| ||| || | ||| Sbjct 36082 TAAAATCAATTCTTTGTTAACAAAATCATTATA 36114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235482804555450