Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq18642 89.7 6e-13 >seq18642 Length=160248 Score = 89.7 bits (98), Expect = 6e-13 Identities = 163/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 89161 CCGATTCAGACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAAC 89220 ||||| ||||| ||| || ||||| | | | ||||| || ||||| || ||| Sbjct 47745 CCGATGATGACGAGTGGGACACGTGGAAGAACATGTCAGATCCCGTTTTGCACATCGAAT 47686 Query 89221 TTAGGAGGTGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGA 89280 | || | ||||| ||| | || || || ||| || || || ||| |||| |||| Sbjct 47685 TGCGGCGCTGGGCCGATGCCCTCATCATAGCTCCATTAGACGCAAACACTTTAGCAAAGA 47626 Query 89281 TAGCTAATGGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGATATATCAA 89340 | || || ||| | || || ||| |||| |||| || | ||||||||||| | | Sbjct 47625 TTGCGAACGGTTTGTGTGATAACCTACTTACTTGTACTATCCGGGCATGGGATCGCTTGA 47566 Query 89341 AGCCCCTTATTTTTTGTCCTGCCATGAATACTCTA-ATGTGGGAACATCCTATTAC 89395 |||| | | |||||||| || |||||||| ||| |||||||| ||||| || || Sbjct 47565 AGCCATTGTTCTTTTGTCCCGCTATGAATAC-CTACATGTGGGATCATCCAATAAC 47511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602663172856720