Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegodyphus_20mimosarum_20[genbank_20GCA_5F000611955.2_202014-08-01] 68,653 sequences; 2,738,704,917 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq12019 125 6e-24 seq16427 93.3 4e-14 >seq12019 Length=383594 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || |||||||||||||| || |||||| | ||||| | || || || || Sbjct 131884 ATGCAAATTTTTGTAAAAACTCTTACTGGCAAGACCATTACGTTAGAGGTAGAGCCCAGT 131825 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||| || || ||||||||||| ||||| ||||| Sbjct 131824 GACACCATTGAAAACGTGAAAGCAAAAATCCAGGATAAAGAAGGCATTCCACCTGATCAG 131765 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || || |||||||| ||||| || || |||| || || || Sbjct 131764 CAGCGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACTCTTTCAGACTATAAT 131705 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 |||||||| || || ||| | ||| Sbjct 131704 ATTCAAAAAGAATCTACCCTTCAT 131681 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || |||||||| || || | || ||| | || || ||||| Sbjct 132796 ATGCAGATATTTGTGAAGACTCTGACTGGAAAAACCATCACTTTGGAGGTAGAACCCAGT 132737 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||||||||||||||| || || || ||||| Sbjct 132736 GATACAATTGAAAATGTAAAAGCTAAAATTCAAGACAAAGAAGGAATTCCTCCTGATCAG 132677 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || |||||||| | || | || ||||| || Sbjct 132676 CAGCGACTTATCTTTGCTGGAAAGCAGTTGGAAGATGGACGTACACTCTCAGATTATAAT 132617 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCG 27202 |||||||| || || ||| | || || |||||||| Sbjct 132616 ATTCAAAAAGAATCTACCCTGCACTTAGTTTTGCG 132582 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| || || || | ||||| | ||||| || || Sbjct 131656 ATGCAGATTTTTGTGAAAACTCTTACAGGAAAAACGATTACATTAGAAGTTGAGCCTAGT 131597 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| |||||| ||||| |||||||| || || || ||||| Sbjct 131596 GACACCATCGAAAATGTAAAAGCAAAAATCCAAGATAAAGAAGGAATCCCTCCAGATCAG 131537 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || ||||| | ||||| | || | || || |||||| Sbjct 131536 CAGAGACTTATTTTTGCTGGGAAACAGCTTGAAGATGGCCGTACTCTGTCTGACTACAAC 131477 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| ||||| || | |||||||||||| | || | ||||| || Sbjct 131476 ATTCAAAAAGAGTCTACTCTTCATTTGGTTTTGAGATTAAGAGGTGGAAT 131427 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||||| || || || | || || | ||||| || || Sbjct 132568 ATGCAGATCTTTGTTAAAACTCTTACTGGAAAAACCATAACATTAGAAGTTGAGCCCAGT 132509 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | |||||| |||||| |||||||| || ||||| ||||||||||| Sbjct 132508 GATACAATAGAAAATGTCAAAGCAAAAATCCAAGACAAGGAGGGCATTCCACCCGATCAG 132449 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | |||| || || || || |||||||| | || | || ||||| ||| Sbjct 132448 CAAAGGCTTATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACATTATCTGATTATAAC 132389 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || ||||| ||||| || || ||| | ||| Sbjct 132388 ATCCAAAAAGAGTCAACATTGCATCTTGTT 132359 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/202 (71%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 26999 TGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGA 27058 ||||||| | || | || ||| | || ||||||||||||||||| ||| | || || Sbjct 125617 TGTAAAATATTTG-CAGGTAAGACGATAACTCTTGAAGTGGAACCAAGTGACACAATAGA 125559 Query 27059 GATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAAT 27118 | || || |||||| ||||| |||||||| || || || ||||| || ||| | || Sbjct 125558 AAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCTCCAGATCAGCAACGTCTTAT 125499 Query 27119 ATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGA 27178 | || ||||| || | ||||| | ||| |||| ||||| |||||||| ||||| Sbjct 125498 TTTTGCTGGCAAGCAGCTTGAAGATGGCAGAACCCTTTCTGATTATAACATTCAGAAGGA 125439 Query 27179 GTCGACCTTACATTTGGTTTTG 27200 || || | ||| | ||| || Sbjct 125438 ATCTACTCTGCATCTTGTTCTG 125417 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27054 ATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGT 27113 ||||| | || ||| |||||| ||||| |||||||| || ||||| ||||| ||| | Sbjct 131288 ATTGAAAATGTTAAAGCAAAAATACAAGATAAAGAAGGTATTCCACCAGATCAGCAGAGG 131229 Query 27114 TTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAA 27173 || || | || || || || | ||||| | || | || || || || |||||| Sbjct 131228 TTGATTTTTGCTGGTAAGCAGCTAGAAGATGGCAGAACATTATCAGACTATAATATTCAA 131169 Query 27174 AAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || |||||| | |||||| | || | |||||||| Sbjct 131168 AAGGAGTCAACATTACATCTTGTTTTGAGGCTGAGAGGTGGCAT 131125 >seq16427 Length=816503 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/143 (75%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 135648 TAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGT 135707 ||||||||||||||||||| || || | || ||||| || ||| || || || | Sbjct 434673 TAGGTTGTATGTGGTCTATATGTGGCATCCATGATCAGGGCTGGGCTGAACGTGCTGTTT 434614 Query 135708 TTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAATTTGT 135767 |||| || || || |||||||||| | | || ||| |||||||||| |||||||| || Sbjct 434613 TTGGAAAAATACGATATATGAACTTTAAAGGCTGTCAAAGAAAATTTGATGTAAATGAGT 434554 Query 135768 ACGTGAGAAAATATA-ATAAAAA 135789 | | |||||||| | | ||||| Sbjct 434553 TCATCAGAAAATACAGAGAAAAA 434531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434545169338560